| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1738 |
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| Symbol | |
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| ID | 4903837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1712101 |
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| End bp | 1713666 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640144844 |
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| Product | putative outer membrane protein TolC |
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| Protein accession | YP_001075772 |
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| Protein GI | 126455930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTC CCGTCTTATA TCGGTTTTTG ACGATCCTGA ATTCACCAAA AAGATGCATG
CGTTTCAACT CGATATTTAA AACGTTTAAT TTGTGTCCCG GACCACTTGA CACAAGGCAG
GAGATGGAGA CGGAGATGTT TGAAACAGAG AATTTGGGTG CCTCGTCTAA ATTTCGGCAT
GCGGGTTTTC ACTTAACGAC AAAATCTTTT CGGCTTCGCG CCAATGTGGC CTACGTTACC
GTTTGCGCGG TGCTTGCCGC ACTCGGCACC GGTTCCGAAT CCGCACGTGC GTTCTGTCTC
GACGAGGCTT ATCAGCACGC AATATCGAAC GATCCGAAAT TTCTCCAGGC GCGGGCGGAA
TACGACGCCG CGCGGCAGAA GTTTCCGCAG GCGCGCGCGC AGATGCTGCC GCAGGTGAGC
GCGCAGCTCG AATGGGGCCG CTACGGCACG CACGCGAACC TGTTCGGCAT CGACGTGAGC
GGCAACAGCA CCGCCGCGTA CGGCGCCGCG CAGCTCTCGC AGGCGCTGTT CAACATGCCG
TATTTGTACG ACATGAGCCG CGCGAAGGAA TTCGAGGAAT CCGCGCGGCA GCAGCTCGAA
GTCGCGAAGC AGGAGCTGAT CATGCGCGTC GCGAACGCGT GCTTCGATCT GCTGTCCGCG
CGCGAGAAGC TGCAGCTCGC CGACGACGAG GTCGGCGCGC TCACGCGCCT GGAGAGCGAT
ACCCGCCGCA TGGCGCAGCT CGGCATGAAG ACCATCGGCG ACACGGCCGA GATCGAGGCG
CGCAGGAGCC TCGCGCAGTC GGACGAGGCG CTCGCGCGCA CCGACGTCGA GGCGCGGCGC
GCCCGCTACG AGACGCTGCT CGGCTCCGCG ATCGACTTCA CGCGCTGGCC GCGGCTCGCG
ATGCACGGCA CGTCGCCGCG CATTCCGACG GGCGACTACC AGCCGCAGGA CAACCCGTCG
TACCAGCAGG CGTATCGCGA CCTGCGCGTC GCGCGGCTCG CGTCCAAGCG CATCAACGCG
GAGCACCTGC CGAGCGTCGA CCTGTTCGCG ACGTACTCAC GCGGCCTCAA TCCGAACCTG
CGCGGCCTCA CCGACAAGAA CGACTTCCAC CAGAGCGCGG TCGGCGTGCA GGTGACGATT
CCGATCTTCT CGGGCGGCAG CGTGCACTAC CGGAAGATCG AGGCCGATCA CGTCGCGACG
CAGTACCAGA ACCGGCTGCG CGAGGTCGAG CAGCAACTGG GCACCGATCA TCGCGAGACG
CTCGCGGCGC TGCAGTCGAT CGGCACGCGG ATCCGCGCGC TGCAGCAATC GCTGCAGGCG
GCGCGGCTCG CGTACGATTC GTCGATGAAG GCGCACCAGG TCGGCTACAG CACGACGTAC
GAGACGCTGA ACCTGCGCAC CGACATCTCG AACATCCGCC AGAAGCTGTT CGAGAGCTAC
CTCGACGCGC TGAAGCTCCA GCTGAAGCTC AAGGGCATTC TCGGCACGCT GGACGAGCAG
TCGCTCGTCG CGGTCGACAG CTTCCTCGCG AGCAACGCGG CGCCCGCCGA TCAGAAGAGC
GAATGA
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| Protein sequence | MAGPVLYRFL TILNSPKRCM RFNSIFKTFN LCPGPLDTRQ EMETEMFETE NLGASSKFRH
AGFHLTTKSF RLRANVAYVT VCAVLAALGT GSESARAFCL DEAYQHAISN DPKFLQARAE
YDAARQKFPQ ARAQMLPQVS AQLEWGRYGT HANLFGIDVS GNSTAAYGAA QLSQALFNMP
YLYDMSRAKE FEESARQQLE VAKQELIMRV ANACFDLLSA REKLQLADDE VGALTRLESD
TRRMAQLGMK TIGDTAEIEA RRSLAQSDEA LARTDVEARR ARYETLLGSA IDFTRWPRLA
MHGTSPRIPT GDYQPQDNPS YQQAYRDLRV ARLASKRINA EHLPSVDLFA TYSRGLNPNL
RGLTDKNDFH QSAVGVQVTI PIFSGGSVHY RKIEADHVAT QYQNRLREVE QQLGTDHRET
LAALQSIGTR IRALQQSLQA ARLAYDSSMK AHQVGYSTTY ETLNLRTDIS NIRQKLFESY
LDALKLQLKL KGILGTLDEQ SLVAVDSFLA SNAAPADQKS E
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