Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1725 |
Symbol | ilvA |
ID | 4904576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1701514 |
End bp | 1703121 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640144832 |
Product | threonine dehydratase |
Protein accession | YP_001075760 |
Protein GI | 126457891 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTCAG ACGACGTCGT CACGGAAACC CCCGAAGCGC CCCCCCGCGA AGCCGTCGCG CCCACGGCGA TCGCGCCGCG CGCGCGCACG CTCGACGATT ACCTGAAGCT GGTCCTGAAC GCGCGCGTGT ACGACGTCGC GCGCGAGACG GCGCTCGAAC GCGCGCGCAA CCTGTCCGCG CGGCTCAACA ACGCCGTCTA CCTGAAGCGC GAGGACAACC AGCCGGTGTT CTCGTTCAAG CTGCGCGGCG CGTACAACAA GATGGCGCAC ATCCCGGCCG ACGCGCTCGC GCGCGGGGTG ATCACCGCGT CGGCGGGCAA CCATGCGCAG GGCGTCGCGT TCTCGGCCGC GCGGATGAAC GTGAAGGCGG TGATCGTCGT GCCGGTGACG ACGCCGCAGG TGAAGGTCGA CGCGGTGCGC GCGCACGGCG GACCGACCGT CGAGGTGATC CAGGCGGGCG AATCGTACAG CGACGCGTAC GCGCACGCGG TGAAGGTGCA GGCCGAGCGC GGCCTCACGT TCGTCCATCC GTTCGACGAT CCGTACGTGA TCGCGGGCCA GGGCACGGTG GCGATGGAGA TCCTGCGTCA GCATCAGGGG CCGATTCACG CGATCTTCGT GCCGATCGGC GGCGGCGGGC TCGCGGCGGG CGTGGCCGCG TACGTGAAGG CGGTGCGCCC GGAGATCAAG GTGATCGGCG TGCAGACCGA CGATTCGTGC GCGATGAAGC AATCGCTCGC GGCGGGCCGG CGCGTCGAGC TCACCGAGGT AGGGCTCTTC TCCGACGGCA CCGCGGTCAA GCTCGTCGGC GAGGAGACGT TCCGCCTCTG CGCGGCGTAT CTCGACGAGG TCGTGACCGT CGATACCGAC GCGCTTTGCG CGGCGATCAA GGACGTGTTC CAGGACACGC GCAGCGTGCT CGAGCCGGCC GGCTCGCTCG CGGTGGCGGG CGCGAAGCGG TATGCGGAGC AGGCGGGCAT CGAGGGCGAG ACGCTCGTGG CGGTTACCTC CGGCGCGAAC ATGAATTTCG ACCGGATGCG CTTCGTCGCC GAGCGCGCCG AGGTGGGCGA GGCGCGCGAG GCGGTGTTCG CGGTGACGAT TCCCGAGGAG CGCGGCAGCT TCAAGCGCTT CTGCGCGCTC GTCGGCGAGC GCAACGTGAC CGAGTTCAAC TACCGGATCG CCGATGCGCG ATCGGCGCAT CTCTTCGTCG GTGTGCAGAT CCGGCGGCGC GACGAATCGG ACGAGATCGC CGCCAACTTC GCCGCGCACG GTTTCACGAG CGTCGACCTG TCGGGCGACG AGCTGTCGAA GCAGCATATC CGCTACATGG TGGGCGGGCG CTCGCCGCTC GCGCACGACG AGCGGCTGTT CCGCTTCGAG TTTCCCGAGC GGCCCGGCGC GCTGATGAAG TTCCTGTCGT CGATGGCGCC CGACTGGAAC ATCAGCCTGT TCCATTACCG CAATCAGGGC GGCGACGCGA GCTCGATCCT CGTCGGCCTG CAAGTGCCGC GGGCGGACCA CGCGGCGTTC GATCGCTTTC TCGCGGCGCT CGGTTATCCG TATCGCGAGG AAACCGGTCA TCCCGCCTAT CGGTTGTTTC TCGGTTGA
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Protein sequence | MQSDDVVTET PEAPPREAVA PTAIAPRART LDDYLKLVLN ARVYDVARET ALERARNLSA RLNNAVYLKR EDNQPVFSFK LRGAYNKMAH IPADALARGV ITASAGNHAQ GVAFSAARMN VKAVIVVPVT TPQVKVDAVR AHGGPTVEVI QAGESYSDAY AHAVKVQAER GLTFVHPFDD PYVIAGQGTV AMEILRQHQG PIHAIFVPIG GGGLAAGVAA YVKAVRPEIK VIGVQTDDSC AMKQSLAAGR RVELTEVGLF SDGTAVKLVG EETFRLCAAY LDEVVTVDTD ALCAAIKDVF QDTRSVLEPA GSLAVAGAKR YAEQAGIEGE TLVAVTSGAN MNFDRMRFVA ERAEVGEARE AVFAVTIPEE RGSFKRFCAL VGERNVTEFN YRIADARSAH LFVGVQIRRR DESDEIAANF AAHGFTSVDL SGDELSKQHI RYMVGGRSPL AHDERLFRFE FPERPGALMK FLSSMAPDWN ISLFHYRNQG GDASSILVGL QVPRADHAAF DRFLAALGYP YREETGHPAY RLFLG
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