Gene BURPS1106A_A1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1679 
Symbol 
ID4904343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand- 
Start bp1647784 
End bp1648806 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID640144785 
Productputative acetylpolyamine aminohydrolase 
Protein accessionYP_001075713 
Protein GI126455635 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACTT ATTTTCATCC GGACCAACTG AAGCACAGTC CGCTCACTTA CCTGTCGCGC 
GGCAAGATGC GCGCGCCGCA CGAAGTGCCC GAGCGAGCCG TGCGGCTGCT CGGCGCGGTG 
ACCTCGCTCG GCTTCGACGT GCGCGCGCCC GAGGATTTCG GCGCGGCGCC GCTCGCGGCC 
GTGCACAGCG AGCCGTATCT GCGCTTTCTC GCCGACGCGC ATCGCGAGTG GCGGCGCATC 
CCGGAGGACT GGGGGCCCGA GGTGATGTCG AACATCTACG TGCGCGAGCC AAATCCGCTG 
CGCGGCGTGC TCGCGCAGGC GGGGTACTAT CTCGCGGACG GCAGTTGCCC GATCGGCGAG 
CACACGTATC GCGCCGCGTA CTGGTCCGCG CAGAGCGCGC TCGCCGGCGC GGCGGCGCTC 
GGCCGCGGCG CGCGCGATGC GTACGCGCTC TGCCGCCCGC CCGGCCATCA TGCGTGCCGC 
GACGCGGCGG GCGGCTTCTG CTATCTGAAC AACGCGGCGA TCGCCGCGCA GGCGTTGCGC 
GCGCGCCATG CGCGCGTGGC GATCCTCGAT ACCGACATGC ATCACGGCCA GGGCATCCAG 
ACGCTGTTCT ACGATCGCGA CGACGTGCTG TACGTGTCGA TTCACGGCGA TCCGACGAAC 
TTCTATCCGG CCGTCACCGG TTACGAAACG GAGCGCGGGG CGGGGCGCGG CGAGGGCTTC 
AACGTGAACC TGCCGATGCC GCACGGCTCG CCCGAAGCGG TGTTCTTCGC GCAGCTCGAG 
CGCGCGAGGT CGCGCGTCGA GCGCTTCGCG CCGGACGTGC TGGTGTTCGC GCTCGGCTTC 
GACGTGTATC GCGAGGACCC GCAGTCGAAG GTCGCGGTGA CGACCGAAGG CTTCGGGCGG 
CTCGGCGCGC TCGTCGGCGG CCTGCGGGTG CCGACGCTGA TCGTGCAGGA AGGCGGCTAT 
CACCTCGAGA CGCTCGAGCG CAACGCCGCC GCGCTGTTTC GCGGTTACGA GGCGGCGCGT 
TGA
 
Protein sequence
MLTYFHPDQL KHSPLTYLSR GKMRAPHEVP ERAVRLLGAV TSLGFDVRAP EDFGAAPLAA 
VHSEPYLRFL ADAHREWRRI PEDWGPEVMS NIYVREPNPL RGVLAQAGYY LADGSCPIGE 
HTYRAAYWSA QSALAGAAAL GRGARDAYAL CRPPGHHACR DAAGGFCYLN NAAIAAQALR 
ARHARVAILD TDMHHGQGIQ TLFYDRDDVL YVSIHGDPTN FYPAVTGYET ERGAGRGEGF 
NVNLPMPHGS PEAVFFAQLE RARSRVERFA PDVLVFALGF DVYREDPQSK VAVTTEGFGR 
LGALVGGLRV PTLIVQEGGY HLETLERNAA ALFRGYEAAR