| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1628 |
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| Symbol | |
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| ID | 4905260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1597982 |
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| End bp | 1598749 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640144734 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001075662 |
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| Protein GI | 126458197 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.908902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT CACGCACCAC GCTGATCACG GGCGCCGCGG GCGGCATCGG CCAGGCGCTC
GTGCGCGGCT TTCTCGCCGC GGGCGACCGC GTGCTCGCGC TCGACCGCGA CCGCGCGGCG
CTCGCCGCGT TCGTCGACGC ACTGGGCGAC GCGGCCGTCG CACCGATCAT CGACGATCTG
ACCGACGCCG AACGCCTCGC GGCCGCGCTC GCGAACGAGC CTGTCGACGT GCTCGTCGCG
AACGCGGGCA CGGCCGCGTC AGCGACGCTG CGCACGACGA CGAGCGCATC GTGGCGCGCG
GATCTCGACG CGAACCTGAC CGCCACCTAC GCGAGCGTCG AGGCCGTGCT CGCCGGCATG
CGCGCGCGGC GACGCGGCGC GATCACGATC ATCGGCTCGG TCAACGGCAT CGCCGCGCTC
GGGCACCCCG CCTACAGTGC GGCGAAGGCG GGACTCATCA GCTATGCGAA ATCGCTCGCC
ATCGAATACG GGCGCGACGG CGTGCGCGCG AACGTCGTGT GCCCCGGCAC CGTGAAGACG
CCCGCGTGGG AAGCGCGCGT GCGGCAGAAT CCGCAGGTGT TCGAGCAATT GAAGAAATGG
TATCCGCTCG AGGATTTCGC GACGCCCGAC GACGTCGCGA ACGCCGCCCT GTTCCTGTCG
TCGGACGCCG CGCGCGCGAT CACCGGCGCG ATGCTGCCCG TCGACGGCGG GCTGCTCGCG
GGCAATCGCG TGATGGCGCA GGAGTTGACG CTCGAATCGT TTTATTGA
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| Protein sequence | MTTSRTTLIT GAAGGIGQAL VRGFLAAGDR VLALDRDRAA LAAFVDALGD AAVAPIIDDL
TDAERLAAAL ANEPVDVLVA NAGTAASATL RTTTSASWRA DLDANLTATY ASVEAVLAGM
RARRRGAITI IGSVNGIAAL GHPAYSAAKA GLISYAKSLA IEYGRDGVRA NVVCPGTVKT
PAWEARVRQN PQVFEQLKKW YPLEDFATPD DVANAALFLS SDAARAITGA MLPVDGGLLA
GNRVMAQELT LESFY
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