Gene BURPS1106A_A1570 details

Gene Information

• Locus tag: BURPS1106A_A1570
• ID: 4904603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1531506
• End bp: 1532216
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640144676
• Product: ATP-dependent transcription regulator LuxR
• Protein accession: YP_001075604
• Protein GI: 126458323
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.778317
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGATGC ACGACTTTCT TCAATTTTGG CTAAACGAAT TTTCACGCAG TGAGAACCCA 
CAGCACGTCA TTTCCGTCTT GACCCGCGCG GCCGCGACGC TCGGCTACGA ATACGCCGCC 
TACGGCATGC GCCGCCCCTT TCCGATCAGC AATCCGCCGA TCCTCATGGT GTCCAACTAT 
CCCGCCCGAT GGCAGGAACG CTATATCGAA GCGCGATTCG CGAACATCGA CGGCGCGGTG 
AAGGCCGCGC TCGGCAGCGA CCGGCCCGTG ACCTGGAGCG CGCCCGCCAA CGCATCGAAA 
AGCGCATTCT GGGCGGAGGC GCTGTCGTTC GGCATCGCCC ACGGCTGGTC GTCCGCGTCG 
CGGGGCGCGG ACGGCGCGAT CGGCGTGCTG ACGCTGTCGA GAACGCAGGA CCCGATCGAC 
ACCGCGGAGA AATTTCGCAA CGAGAGCATC GTGCACTGGC TCGCCAATGT CGCTCATGCG 
TCGATGGCGC CGTTCCTGCC CGCCGCCGAC GAGTTCGATC CGGACCTCAC GCGCCGCGAG 
ACCGATGTGC TGAAATGGAC GGCCGACGGA AAGACAGCGT ACGAAATCGC GCTGATTCTC 
AGCATCTCGG AGAGCACCGT CAATTTTCAC GTGAAGAATA TCGTCTCCAA GCTGGGCTCC 
ACGAACAAGA TACAGGCCGT GGCCAAGGCC GCGCTGATGG GGATGCTGTG A 

 

Protein sequence

MEMHDFLQFW LNEFSRSENP QHVISVLTRA AATLGYEYAA YGMRRPFPIS NPPILMVSNY 
PARWQERYIE ARFANIDGAV KAALGSDRPV TWSAPANASK SAFWAEALSF GIAHGWSSAS 
RGADGAIGVL TLSRTQDPID TAEKFRNESI VHWLANVAHA SMAPFLPAAD EFDPDLTRRE 
TDVLKWTADG KTAYEIALIL SISESTVNFH VKNIVSKLGS TNKIQAVAKA ALMGML