Gene BURPS1106A_A1550 details

Gene Information

• Locus tag: BURPS1106A_A1550
• ID: 4904483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1496650
• End bp: 1498692
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640144656
• Product: sensory box histidine kinase
• Protein accession: YP_001075584
• Protein GI: 126455525
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4585] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCA GCGGGATCAG CCCTGGCGCA TCGCGCGATG CGTCCCGTAC CGATCGGCGC 
GGCGCGCTCG TCGCCGTGGC CGTCGCCGCG CTGGGCGTTG CCGCGTCGTA CGGCGTCGCG 
CGGCTCGTGC TGCAGCAGGA GCGCCATGCC GCGCAGGCGC GTTTCGAGCG CCGCGCCGCG 
CATATGACGA CGACGCTGCG CCAAGAGCTG CTGACGACCG CGACCGTGCT GCGCGGCGCG 
CGCGGCATGC TCGGCGAGCG CGCGTCGCCC GCCTCCGTCG GCTGGACGAA CTATCAGGCG 
CAGCTCGATC TCGACCGCGC GCGCTCGCCG ATCCGCTCGC TCGGCTTTGT CGATGCGAAG 
ACCGTCATCG GCGCCGGCGC GCAGACCGGC GCCGATCCTC AGACGCGCGC GGCGCTGTTG 
CGCGCCGCGG ATTCCGGCCT GGCGACGCTC GACGCGCACG CGGCGCCCTC CGACGGCGCC 
TACGCGCCGG ACAGCGGCGC GGGCGCGCTC GCGCTGTACC TGCCCGTCTA CGCGGCGAAC 
GGCCCGCTGC CCGCCGCCGA GCGCCGCCGC GCGGACACGG CCGGCTTCGT CGTGGCGACG 
CTCGATGCGC GCCGCTTGGT CGAGCTGTCG AGCGCGAACG ATCGCGACAT CGACCTGCGC 
CTGAGCGCGG GCGAGGCGGG CCTGCTCGTC TACACGACCG AGCGCGACTA CAGCGGCGCG 
GACGCGTCGC ATCCGCCGCT CGTGCGCACG GATTCGCTCA ACTTCGGCGG CACGCCGCTC 
ACGCTCGCCT ATACGACCGA AAACCGCTGG GCGGCGATCC GCTCGAACGC CGTCGCGACC 
ACGGTGTTCG TCGCCGGCGC GGCGACCTCC GCGCTGCTCG CGGTGCTCGC GTATCTGCTC 
GTCGGCGCGC GCGAACGCGC CGCGGACGAC AGCCCGCTCA ACGAAGCGCG GATGATGGGC 
ATCATCCGCT CGTCGATGGA GGCGATCATC ACGGTCGACG AAACGCAGAC GATCGTGATC 
TTCAACCCGG CCGCCGAGCG CGTGTTCGGC GTGTCCGCGA TGGACGCGAT CGGCTCGCCG 
CTCGCGCGCT TCATTCCCGA GCGCTTTCGC GCGGCGCACG CGAAGCACGT CGAGCAGTTC 
GGCGTGACGG GCGTGTCCGA GCGGCAGATG GGCCGCCAGC GCGTGCTGTT CGGGCTGCGC 
GAGAACGGCG AGGAGTTTCC GATCGAGGCG TCGATCTCGC AGATCCGCGA CGGCTCCGGC 
AAGCTGTACA CGGTGATGCT GCGCGACGTC ACCGAGCGGG TGCGCAACGA GAACGCGCTG 
CGGCAATCGC GCGAGGAACT GCGCGAGCTG TCCGCGAACC TGCAGAACGT GCGCGAGGAA 
GAGAAGACGC GGATCGCGCG CGAACTGCAC GACGACCTCG GCCAGCAACT GACCGCGCTC 
AAGATGGACG TGTCGGCGGT CGCGATCGCG CTCGCCCGCT ATCGCGACAC GCAGGCCGAC 
GCGCCGCCGA TCGCGGCCGT CGAGCAGCAA TTGCACGGCA TGCGGCGGCT CATCGATTCG 
ACGGTCGCGT CGGTGCGGCG CATCGCGGCC GACCTGCGGC CCGTGATGCT CGACGATCTC 
GGCCTCGTGC CGGCGATCGA ATGGCTCGTG AACGATTTCA CCAATCGCTA CGGGATCGAC 
GTCGAGCGCC GGCTCGACAC CGCCGACACG AGCTTCTCGA ACGCCGGCGC GACCACGCTG 
TTTCGCATCG TCCAGGAGGC GCTGACGAAC GTCGCGCGCC ACGCGGACGC GACTCGCGTC 
GACCTCACGC TCGCGATCGA CCAGGACTTC TGCCTGCTGC AGATCAGGGA CGACGGACGC 
GGCGTGCCAT CCGACGAACG CCGCGACGCG AACGGCGACA AGTCGTTCGG CCTCATCGGC 
ATCCGCGAGC GCGCGCACAT GCTGAGCGGC ACGGTCACGA TCGACTCGGC GCCCGGGCAG 
GGTTTCTCGA TCAAGGTCGC GCTGCCGCTC GCCGCGATCC GGCAGACGGA CGCGCTCCTA 
TGA 

 

Protein sequence

MTASGISPGA SRDASRTDRR GALVAVAVAA LGVAASYGVA RLVLQQERHA AQARFERRAA 
HMTTTLRQEL LTTATVLRGA RGMLGERASP ASVGWTNYQA QLDLDRARSP IRSLGFVDAK 
TVIGAGAQTG ADPQTRAALL RAADSGLATL DAHAAPSDGA YAPDSGAGAL ALYLPVYAAN 
GPLPAAERRR ADTAGFVVAT LDARRLVELS SANDRDIDLR LSAGEAGLLV YTTERDYSGA 
DASHPPLVRT DSLNFGGTPL TLAYTTENRW AAIRSNAVAT TVFVAGAATS ALLAVLAYLL 
VGARERAADD SPLNEARMMG IIRSSMEAII TVDETQTIVI FNPAAERVFG VSAMDAIGSP 
LARFIPERFR AAHAKHVEQF GVTGVSERQM GRQRVLFGLR ENGEEFPIEA SISQIRDGSG 
KLYTVMLRDV TERVRNENAL RQSREELREL SANLQNVREE EKTRIARELH DDLGQQLTAL 
KMDVSAVAIA LARYRDTQAD APPIAAVEQQ LHGMRRLIDS TVASVRRIAA DLRPVMLDDL 
GLVPAIEWLV NDFTNRYGID VERRLDTADT SFSNAGATTL FRIVQEALTN VARHADATRV 
DLTLAIDQDF CLLQIRDDGR GVPSDERRDA NGDKSFGLIG IRERAHMLSG TVTIDSAPGQ 
GFSIKVALPL AAIRQTDALL