| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1505 |
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| Symbol | ribD |
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| ID | 4905983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1457465 |
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| End bp | 1458652 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640144611 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001075539 |
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| Protein GI | 126457369 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0593301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGT TCTCCGACAT CGACCGCACG CACATGGCCC ATGCGCTGCG GCTCGCCGAA
CAGGGGCTTT ACACGACGCA TCCGAACCCG CGCGTGGGCT GCGTGATCGC GCGCGGTGCC
CGCACGCTCG GCGCGGGCTG GCACCGCCGC GCGGGCGAAC CGCACGCGGA AGTGCACGCG
CTGCGCGAAG CGGGCGAGCG CGCACGCGGC GCGACCGCGT ACGTGACGCT CGAGCCCTGC
GCGCACTTCG GCAGGACGCC GCCGTGCGCG AACGCGCTCG TCGCGGCGGG CGTCGCGCGC
GTCGTGATCG CCGCGCGCGA TCCGTTCGAG CAGGTCGCCG GGCGCGGCGC GGCGCGCCTG
GCCGACGCGG GCATCGTCGT CGAGCAGGGG TTGCTGGCGG CGCAGGCGCG CGAGCTGAAC
ATCGGCTTCT TCAGCCGGAT CGAGCGCGGC CGGCCGTGGA CGCGCGCGAC GCTGGGCTTG
CCGATCGACG CCCCGCCGGC GCTCGATTCG GCCGAGCTGG CGGCGCTTGA CGCGGCGCTG
TCCGAGGCGC GCGACGATCT CCGGCACTGG CGCGCGCGCA GCTCGCTCGT GCTCGAACGC
GCGCCCGACG CCGGGCGCGC CGTCGGGTGC AACGCAGCCG CGCCCCGCTA CGTCGTGAGC
GCGCGGGACT GCGCAGCGCT CGGCGCGGCG AGCGCCGCGT GCGCGCCCGC CGACGGCGTG
CCGACGCTCG CGCTGCATCG CGACGACAAC AGCGCAAGCG CATGCGAAGA CGCGCACGGC
ATCGGCCATC GTGCCCGTCG CGTCGACCGC GTCGATCACG CCGATGCGCG GCCCGCCGGC
GCACCGTCGG CTTCGGCTCC CGACACCGAC GCCGGCCTGC CCCTGCCCGA CGCGTTCGCG
CGGCTCGCGC GGCAAGGCGT CAACGAGCTG CTCGTCGACG CCGATCTTGC GTTGTGCGAC
GCGCTGTTCG GCAGCGATCT CGCCGACGAG CTGCTGCTGT ACGCGCACCC GGCGCGCCGC
GACGCGCCCG TATCGGCGTC GCGGCTCGCC GCGGCGATCG ACGACGTCGC GCGCCGCTGG
GGCCTGCGGC CGCTCGAGCG TCTCGCGATC GGCCGCGGCG AGCGGATCCT GCTGCGCCGC
GCGCGCGGGC CCGAGCCCCG GCAAGGCGAG CCGGGCGTCA TCCCCTAG
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| Protein sequence | MSAFSDIDRT HMAHALRLAE QGLYTTHPNP RVGCVIARGA RTLGAGWHRR AGEPHAEVHA
LREAGERARG ATAYVTLEPC AHFGRTPPCA NALVAAGVAR VVIAARDPFE QVAGRGAARL
ADAGIVVEQG LLAAQARELN IGFFSRIERG RPWTRATLGL PIDAPPALDS AELAALDAAL
SEARDDLRHW RARSSLVLER APDAGRAVGC NAAAPRYVVS ARDCAALGAA SAACAPADGV
PTLALHRDDN SASACEDAHG IGHRARRVDR VDHADARPAG APSASAPDTD AGLPLPDAFA
RLARQGVNEL LVDADLALCD ALFGSDLADE LLLYAHPARR DAPVSASRLA AAIDDVARRW
GLRPLERLAI GRGERILLRR ARGPEPRQGE PGVIP
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