| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1497 |
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| Symbol | |
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| ID | 4904571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1448188 |
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| End bp | 1451298 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640144603 |
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| Product | RND HAE1/HME family protein |
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| Protein accession | YP_001075531 |
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| Protein GI | 126456706 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCG GCGCGCCCCA CGATTCCGGC GCGGCCCGCG CGCGCTTCAC GGACGTGTTC
GTCCGCCGCC CGGTGCTGTC GCTCGTGTTC AGCCTGCTGA TCCTGCTCGT CGGCCTGCGC
GCGCTGATGT CGCTGCCGGT GCGCCAGTAT CCGGCGCTGG AGAGCGCGAC GATCAGCGTC
GCGACCGATT ATCCCGGCGC GTCGCAAGAG CTGATGCAGG GCTTCGTGAC GACGCCGATC
GCGCAATCGA TCGCGACCGC CGACGGCATC GAGTACATCA CGTCGACGAC GACGCAGGGC
AAGAGCGTCG TGAAGGCGCG GCTGCGCCTG AACGCGAACG CGGACCGCGC GATGACCGAG
GTGATGGCCA AGGTCCAGCA GGTGAAGTAC AAGCTGCCCG CCGACGCGTA CGATTCGGTG
ATCACGAAGC TCACCGACGC GCCGACCGCG GTGATGTATC TCGGCTTCGC GAGCGATGCG
CTGTCCATTG CGCAGATCAC CGATTATGTG GTGCGCGTCG CGCAGCCGCT CGTGACGACG
GTGCCGGGCG TCGCCTCCGC CGAGATTCTC GGCGGCCAGA ACCTCGCGAT GCGCGTCTGG
CTCGACGCGA CGCGGCTCGC CGCGCACGGG CTGTCCGCGG GCGACGTCGC CGCGGCGATC
CGCGCGAACA ACGTGCAGGC GGCGCCGGGT CAGGTCAAGG GCTCGCTCAC GATCGCCGAC
ATCTCGGCGA ACACCGATCT GACCGACGTC GGCGCATTCA ACGAGATGGT CGTGAAAAGC
GCGCCGAACG GTGGCGGCCT CGTGCGGCTG AAGGATGTCG CGACCGTGGA GATCGGCGGC
GAGAACTACA ACTCGAGCGC GCTGATGAAC GGCCGCCGCG CGGTGTACAT CGCGGTCAAC
GCGACGCCCG CGGGCAACCC GCTCGAGATC GTGCGCGGCG TCGGCGCGGT GCTGCCCGCG
ATGGAGCGCA ACAAGCCCGC GAGCGTGCAG ATCGCGAACA TGTTCGACGG CGCGCGCTTC
GTCAACGCGT CGATCGCCGA AGTCCGCTCG ACGCTCACCG AGGCGATCGC GATCGTCGTC
GTCGTGATTT TCCTGTTCCT CGGCTCGTTT CGCGCGGTGA TCATCCCGGT GCTGACGATT
CCGCTGTCGC TCGTCGGCTC GGCGGCGCTG ATGCTGGCCG CGGGCTTCTC GCTGAACCTG
CTGACGCTGC TCGCGATGGT GCTCGCGATC GGGCTCGTCG TCGACGACGC GATCGTCGTC
GTCGAGAACA TCCACCGCCA CATCGAGCAG GGCGAGCCGC CCGTGCGCGC GGCGCTGATC
GGCGCGCGCG AGATCGCGTC GCCCGTGCTC GTGATGATGG CGACGCTGAT CTCCGTCTAC
GCGCCGATCG GGCTGATGGG CGGCCTCACC GGCTCGCTGT TCAAGGAGTT CGCGTTCACG
CTCGCGGGCG CGGTGCTCGT GTCGGGCATC GTCGCGCTCA CGCTCTCGCC GATGCTCGGC
TCGCTGCTGC TCACGAGCAG GATGTCCGAG GGCCGCGTCG CGAAGGCGAT CGAGCGCACG
CTCGAGCGCG TGACGCACGC GTACCGGCGC GGCCTGCACG CAAGCCTCGC CGCGCGGCCC
GCGATTCTGC TGATCGGCGC CGGCGTGCTC GCGGGCATCG TGCTGCTCTT CTCGGGCGTG
AAGCGCGAGC TCGCGCCGCA GGAGGACCAG GGCTCGATCA TGGTCGCGGT GAAGGCGCCG
CAGTATGCGA ACCTCGATTA CATGGAGCGC TACGCGCCCG ACATCGAGCG CGTGTTCCGC
ACGCTGCCCG AGGCCGACAC GAGCTTCATC CTGAACAGCT ACGGCGGCAG CAATCTCGGC
TTCGCGGGCG TGAACCTCGT CGATTGGGAC AAGCGCACGC GCAGCGCGGC GGCGCTGCAG
GCGCTGATCC AGGCGCGCGG CGACGGGATC CGCGGCGAGC GCGTGTTCGC GTTCCAGTTG
CCGGCGCTGC CCGCGTCGAG CGGCGGGCTG CCGATCCAGA TGGTGCTGCG CACGCCGTCG
GGTTTCGCCG ATCTCTACGC GCAGATGGAG CGGATCAAGG CGGCCGCGCA AAAGAGCGGC
CTCTTCGCGG TGCTCGACAG CGATCTGACG TTCGACAGCC GCGCGGTGGG CGTGACGATC
GACCGCAATC AGGCGAACAC GCTCGGCGTG ACGATGAAGG ACATCGCCGA CACGCTCGCC
GTGCTCGTCG GCGAGAACTA CGTGAACCGC TTCAACTTCA AGGGCCGCTC ATACGACGTG
ATCCCGCAGG TGTCGCGCAG CGAGCGGCTG TCCTCCGAGA TGCTCAGCCG CTATTACGTG
AAGACGGGCT CGGGGCAGAT GATTCCGCTG TCGACCGTGA TTCAAGTGAC CAACGGCAGC
CAGGCGAACG CGCTCAGCCA GTTCAACCAG ATGAACGCGG CGACGTTCTC CGCGGTGCCC
GCGCCCGGCG TGACGATGGG CGACGCGGTG GCGTTCCTCG AGGCGCAGAA GCTGCCCGCC
GGCTTCTCGA TCGACTGGCT CGGCGAATCG CGGCAATACG TGCAGGAAGG CAACCGGCTC
GCCGTCACGT TCGGCTTCGC GCTGATCGTG ATCTTCCTCG TGCTCGCCGC GCAGTTCGAG
AGCCTGCGCG ATCCGCTCGT GATCCTGGTG TCGGTGCCGC TGTCGATCTG CGGCGCGCTC
GCCCCGCTCT ACCTCGGTTT CGCGACGCTC AACATCTATA CGCAGATCGG GCTCGTCACG
CTGATCGGGC TGATCTCGAA GCACGGGATC CTGATGGTCA GCTTCGCGAA CGATCTGCAG
CGCCACGAAG GGCTCGACCG GCGCGCGGCG ATCGAGCGCG CGGCGGCCGT GCGGCTGCGT
CCGATCCTGA TGACGACCGC GGCGATGGTC GCGGGCCTCG TGCCGCTCGT GTTCGCCGCG
GGCGCCGGCG CGGCGAGCCG CTTCGCGATC GGCATCACGG TGTCGACCGG CATGCTGGTC
GGCACGCTGT TCACGCTGTT CGTGCTGCCG ACCGTCTATA CGTTCGTCGC GAAGGATCAC
GGCGCGGCGA TGCGCAGCGA GCGCGCGCAA CTGCTCGCCG CCACTCGGTA A
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| Protein sequence | MNAGAPHDSG AARARFTDVF VRRPVLSLVF SLLILLVGLR ALMSLPVRQY PALESATISV
ATDYPGASQE LMQGFVTTPI AQSIATADGI EYITSTTTQG KSVVKARLRL NANADRAMTE
VMAKVQQVKY KLPADAYDSV ITKLTDAPTA VMYLGFASDA LSIAQITDYV VRVAQPLVTT
VPGVASAEIL GGQNLAMRVW LDATRLAAHG LSAGDVAAAI RANNVQAAPG QVKGSLTIAD
ISANTDLTDV GAFNEMVVKS APNGGGLVRL KDVATVEIGG ENYNSSALMN GRRAVYIAVN
ATPAGNPLEI VRGVGAVLPA MERNKPASVQ IANMFDGARF VNASIAEVRS TLTEAIAIVV
VVIFLFLGSF RAVIIPVLTI PLSLVGSAAL MLAAGFSLNL LTLLAMVLAI GLVVDDAIVV
VENIHRHIEQ GEPPVRAALI GAREIASPVL VMMATLISVY APIGLMGGLT GSLFKEFAFT
LAGAVLVSGI VALTLSPMLG SLLLTSRMSE GRVAKAIERT LERVTHAYRR GLHASLAARP
AILLIGAGVL AGIVLLFSGV KRELAPQEDQ GSIMVAVKAP QYANLDYMER YAPDIERVFR
TLPEADTSFI LNSYGGSNLG FAGVNLVDWD KRTRSAAALQ ALIQARGDGI RGERVFAFQL
PALPASSGGL PIQMVLRTPS GFADLYAQME RIKAAAQKSG LFAVLDSDLT FDSRAVGVTI
DRNQANTLGV TMKDIADTLA VLVGENYVNR FNFKGRSYDV IPQVSRSERL SSEMLSRYYV
KTGSGQMIPL STVIQVTNGS QANALSQFNQ MNAATFSAVP APGVTMGDAV AFLEAQKLPA
GFSIDWLGES RQYVQEGNRL AVTFGFALIV IFLVLAAQFE SLRDPLVILV SVPLSICGAL
APLYLGFATL NIYTQIGLVT LIGLISKHGI LMVSFANDLQ RHEGLDRRAA IERAAAVRLR
PILMTTAAMV AGLVPLVFAA GAGAASRFAI GITVSTGMLV GTLFTLFVLP TVYTFVAKDH
GAAMRSERAQ LLAATR
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