Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1485 |
Symbol | |
ID | 4906190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1440043 |
End bp | 1440825 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640144591 |
Product | S54 family peptidase |
Protein accession | YP_001075519 |
Protein GI | 126456442 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0631033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCAGG TGAATCACGT TGACGGCGTT GAACGGCGGG TCGGCCGCCG CGCGGGCGGC TGCGCCGCGA ACCCGTGCGC GACGGCGCGC GGAATGGGCC GCGCCGGCAC GGATGGCGCC GCGCGATGCG CTCATAATGA CCGTCGACGC CTCACTCTTT CGCCCGTGGC CGCCATGACG CTCGCCATCG TCGTCCTGAA CGTGATCGGT TTCTTCGTCG AGCTCGCCGC GCCCGAGCGC GTGCTGTCGC TGTTCGCGCT ATGGCCGCCG CGCGCGGGCG CGGGCTTGCC GCCCGCCGCC GCGCCCGCGT TCCATGTCTG GCAGCTCGTC ACGTACAGCG CGCTGCACGC GGGGCTGTCG CACCTGCTGT TCAACATGCT CGGGCTCGTG ATGTTCGGCC GCGATGTCGA GCGCGCGCTC GGCCGCGCGC GCTTCGGCGC GCTGTATCTC GCGAGCGTCG TATGCGGCGC GCTCACGCAG CTCGCGCTCG CGCGCTATTC GGCGGCGGCC GCCGCGCCGA CGATCGGCGC GTCCGCCGGC GTGTTCGGCG TGCTCGCCGC GTACGCGCTG CTGTACCCGT CGCGCCGCGT CGTGCTGCTG ATTCCGCCGA TTCCGATGCG CGCGTGGGTG TTCGCGCTGC TCTACGCGGG GGGCGAACTG CTGCTCGGCG TCGCGGGCGC GGCAAGCGGC ATCGCGCATT TCGCGCATCT GGGCGGGATG TTCGGCGCGA TCGCGCTGAT GCTGGCATGG GGACGGCCGC GCAGCGAATG GCCGGTTCAA TGA
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Protein sequence | MDQVNHVDGV ERRVGRRAGG CAANPCATAR GMGRAGTDGA ARCAHNDRRR LTLSPVAAMT LAIVVLNVIG FFVELAAPER VLSLFALWPP RAGAGLPPAA APAFHVWQLV TYSALHAGLS HLLFNMLGLV MFGRDVERAL GRARFGALYL ASVVCGALTQ LALARYSAAA AAPTIGASAG VFGVLAAYAL LYPSRRVVLL IPPIPMRAWV FALLYAGGEL LLGVAGAASG IAHFAHLGGM FGAIALMLAW GRPRSEWPVQ
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