| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1484 |
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| Symbol | |
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| ID | 4903508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1438418 |
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| End bp | 1439908 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640144590 |
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| Product | basic amino acid/polyamine antiporter (APA) family protein |
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| Protein accession | YP_001075518 |
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| Protein GI | 126456544 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0574434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATT CCGTCAGGCA TCCTTTCCAC CCGTCGACAC CGCTGCCCGC GCGCGCCTCC
GCGCCGCTGC GGGCGGCCGC GCCGCGCCAG TTGCCGTTTG CGCTGCTCAC GGCGCTTGTG
ATCGGCTCGA TGATCGGCAG CGGCATCTTC TCGCTGCCGC AGAACATGGC ATCCGGCGCG
GGCGCCGGCG CGATCGTGAT CGGCTGGGCG ATCACGGGCG TCGGCATGCT GATGCTCGCG
CTCGTCTACC AGACGCTCGC GCATCGCAAG CCCGAGCTCG ACAACGGCGT CTACGCGTAC
GCGCACGCGA GCGCCGGCGA CTTCGTCGGC TTCAACTCCG CATGGGGCTA CTGGGTCAGC
GCGTGGATCG GCAACGTCGG CTATTTGGTG ATCGTGTTCG GCACGCTCGG CTACGCGTTT
CCGGCGTTCG GCGACGGCAA CACGCGCGCC GCGGTGATCG GCGCGTCGAT CGTGCTGTGG
ATCATGCACG CGGTGATCCT GCGCGGCGTG CGCGGCGCGG CGATCCTCAA CGCGCTGACG
ACGATCGCGA AGATCGTGCC GCTCGTGCTG TTCGTCGCGC TCGCCGCGCT CGCGTTCCAG
CCGCACCGCT TCACGACCGA CTTCTGGGGC AACGTCCACC TGGCCGGCGT GCTCGACCAG
GTGAAGAGCA CGATGCTGAT CACCGTCTGG GTGTTCATCG GCATCGAGGG CGCGAGCGTC
TATTCGGCCC GCGCGAAGAG CCGCGACGAC GTCGGCCGCG CGACCATCGT GGGCTTCGTC
GTCGTGCTGC TGTTGCTGAT GGCCGTCTCG CTGCTCTCGC TCGGGATCGT GTCGCAGCCC
GAGCTCGCGG CGATGAAGAA TCCGTCGATG GCGGGCGTGC TCGAAAAGGC GATCGGCCGC
ACGGGCGTCG CGATCGCGGG CGTCGGGCTG CTGGTGTCGG TGGGCGGCGC GCTGCTCGCA
TGGACGCTGC TCGCCGCCGA GGCGATGTTC ACGCCGGCCA AGGACGGCGT GATGCCGGCG
TTCCTGTCGC GCGAGAACGC GCACGGCGTG CCCGCCAACG CGCTGTGGGC GACCAACGGC
CTCGTGCAGC TGTTCCTGCT CGTCACGCTC GTGTCGAACG CGACGTATCA GGCGCTGATC
TCGCTCGCGA CGTCGATGAT CCTCGTGCCG TACCTGTTCT CCGCCGTCTA TGCGCTCGTC
ATCGCGATCA AGGGCGAAGG CTATGCGCCC GGCGAGGCGG TGCGCGTGCG CGACGCGACG
ATCGGTGCGG TCGCGACCGT CTACTGCTGC TGGCTGCTGT ATGCGGCGGG CCCGAAATAC
CTGCTGCTGA GCGCCCTCCT CTATGCGCCG GGCGCGCTGC TGTACGCATG GGCGAAGCGC
GAGCGCGGCG AGCGGCCGTT CAAGCCGTTC GAAGCGGCGA TCCTGATCGC GCTCGTCGCG
TTCGCGTCGC TCGCGGGCTG GCTCGTCGCG GCGGGCCGGA TCAGCCTGTA A
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| Protein sequence | MKHSVRHPFH PSTPLPARAS APLRAAAPRQ LPFALLTALV IGSMIGSGIF SLPQNMASGA
GAGAIVIGWA ITGVGMLMLA LVYQTLAHRK PELDNGVYAY AHASAGDFVG FNSAWGYWVS
AWIGNVGYLV IVFGTLGYAF PAFGDGNTRA AVIGASIVLW IMHAVILRGV RGAAILNALT
TIAKIVPLVL FVALAALAFQ PHRFTTDFWG NVHLAGVLDQ VKSTMLITVW VFIGIEGASV
YSARAKSRDD VGRATIVGFV VVLLLLMAVS LLSLGIVSQP ELAAMKNPSM AGVLEKAIGR
TGVAIAGVGL LVSVGGALLA WTLLAAEAMF TPAKDGVMPA FLSRENAHGV PANALWATNG
LVQLFLLVTL VSNATYQALI SLATSMILVP YLFSAVYALV IAIKGEGYAP GEAVRVRDAT
IGAVATVYCC WLLYAAGPKY LLLSALLYAP GALLYAWAKR ERGERPFKPF EAAILIALVA
FASLAGWLVA AGRISL
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