Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1426 |
Symbol | |
ID | 4904347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1390276 |
End bp | 1391286 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640144532 |
Product | putative carbohydrate ABC transporter, periplasmic sugar-binding protein |
Protein accession | YP_001075460 |
Protein GI | 126457631 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.134002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTCG CCGTCGCGCT CGCGATCGGC GCCGCCCCCG CTTGCGCGTC GTCCGCCGCC GGCGCTGCGC CGCCCGGGCC GCGCGCGGGC CATGCGCCGC TGTCGCTCGC CGGCAAGCGG ATCGGCATCA CGGCGGCCGG CACCGATCAC TACTGGGATC TGCAGGCGTA CCAGGGCGCG GTAGACGAAG TGAAGCGCCT CGGCGGCACG CCGATCGCGC TCGACGCCGG CCGCAACGAC AGCCGCCAGA TCGCGCAGAT CCAGACGCTG ATCGCGCAAC AGCCCGATGC GATCATCGAG CAGCTCGGCA CCGCATCCGT GCTCGAGCCG TGGCTCAGGA AAATCCGGCA AGCGGGCATC CCGCTTTTCA CGATCGACAC CGCGTCGCCG TCGAGCCTGA ACGTCGTCAC GTCGGACAAT TTCGCGATCG GCTCGCAGCT CGCGCTGAAG CTCGTCAACG ATATCCGCGG CGAAGGCAAC GTCCTCGTGT TCAACGGCTT CTACGGCGTG CCCGTGTGCG CGATCCGCTA CGACCAGCTG AAAGCCGTGC TGAAGTGGTA TCCGAAGGTG AAGATCATCG AGCCCGAGCT GCGCGACGTG ATTCCGAACA CGGCGCAGAA CGCGTACGCG CAGATCAGCC AGTTGCTGCA GAAGTATCCG AAAGGCACGA TCTCGGCGAT CTGGGCCGCG TGGGACATTC CGCAGGTCGG CGCGACGCAG GCGGTCGACG CGGCCGGCCG ACGCGAGATC CGCACGTACG CGGTGGACGG CAGCCCCGAG GCGGTCGCGC TCGTGAGGAA TCCGACCTCG AGCGCGGCGG CCGTCGTCGC GCAGCAGCCG GCGCTGATCG GCCGCACCGC CGTGCGCAAC GTCGCGCGCT ATCTGGCGGG CGACCGATCG CTGCCCGCGT ACACGTTCGT GCCGTCGGTG CTCGTCACGA AGGACGACGC GGGTGTCGCG CGGCCTGCGC TCGGGCAGAC GCCGGCCGCC GCCGGGCTCG CGCGGCGATG A
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Protein sequence | MLFAVALAIG AAPACASSAA GAAPPGPRAG HAPLSLAGKR IGITAAGTDH YWDLQAYQGA VDEVKRLGGT PIALDAGRND SRQIAQIQTL IAQQPDAIIE QLGTASVLEP WLRKIRQAGI PLFTIDTASP SSLNVVTSDN FAIGSQLALK LVNDIRGEGN VLVFNGFYGV PVCAIRYDQL KAVLKWYPKV KIIEPELRDV IPNTAQNAYA QISQLLQKYP KGTISAIWAA WDIPQVGATQ AVDAAGRREI RTYAVDGSPE AVALVRNPTS SAAAVVAQQP ALIGRTAVRN VARYLAGDRS LPAYTFVPSV LVTKDDAGVA RPALGQTPAA AGLARR
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