| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1356 |
|---|
| Symbol | |
|---|
| ID | 4904186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 1282054 |
|---|
| End bp | 1282767 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640144462 |
|---|
| Product | His/Glu/Gln/Arg/opine ABC transporter permease |
|---|
| Protein accession | YP_001075391 |
|---|
| Protein GI | 126457790 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCAGA TCATCGGCCA ATATTGGCAG AACTACCTGT TCAGCGACGG CTACCGGTTG
AGCGGCCTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGC TCGGGCTCGG CTTCGGCCTC
GCGGTGCCGC TCGCGATCGC GCGCGCGTCG CGCAACCGCG CGGTGTCGGG CGCGGTGTGG
CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AACTGCTGCT CTGCTACACG
GGCATCTACA GCCTGAGCGT CGTGCACGAT CACGCGTGGC TCGACAGCTT CTTTCGCAGC
GCGATGAACT GCACGCTGCT CGCGTTCACG CTGAACGAGT GCGCGTACGC GACCGAGATC
TTCGCGGGCG CGATCAAGTC GACGGCGCCG GGCGAGATCG AGGCGGGGCT CGCGTACGGC
ATGTCGCGCT TCAAGCTGTA CACGCGGGTG ATCCTGCCGT CGGCGCTGCG CCGCGCGCTG
CCGAGCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGCTCGC GTTCACGGCG
ACGGTGCCCG ACATCCTGAA GGTCACGCGC GACGTCAATT CGGCAACCTA CGCATCGTTT
CAGGCCTACG GGATCGCGGC CGCGCTGTAC GCGGTCGTCG TGTTCGCGCT GATCTGGCTG
TTCCGCCGGA TGGAGGCGCG CTGGCTCGCG TACCTGAGGC CGCAGGGGCA TTGA
|
|---|
| Protein sequence | MIQIIGQYWQ NYLFSDGYRL SGLAITLWLL VVSLGLGFGL AVPLAIARAS RNRAVSGAVW
LYTYVFRGTP LYVQLLLCYT GIYSLSVVHD HAWLDSFFRS AMNCTLLAFT LNECAYATEI
FAGAIKSTAP GEIEAGLAYG MSRFKLYTRV ILPSALRRAL PSYSNEVILM LHATTLAFTA
TVPDILKVTR DVNSATYASF QAYGIAAALY AVVVFALIWL FRRMEARWLA YLRPQGH
|
|---|
| |