Gene BURPS1106A_A1312 details

Gene Information

• Locus tag: BURPS1106A_A1312
• Symbol: vanX
• ID: 4904009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 1238951
• End bp: 1239520
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640144418
• Product: D-alanyl-D-alanine dipeptidase
• Protein accession: YP_001075347
• Protein GI: 126457047
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2173] D-alanyl-D-alanine dipeptidase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.506503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGACAT CCGCCCATCG CCTCGTCGAG ATCGCGCCGC ACACGCACGG CGTCGACGTC 
GATCTCGTCT ACGCGACCGA GCGCAATCTG ACCGGCCAGC CGATCTACCG GCGCGCGCAC 
TGCCTGCTGC TCGAGCCGGC CGAAGCGGCG CTGCGCCGCG CGGTCGCGGT CGCCGCGCGA 
AGCGGCCTGC GGCTGAGAAT CTATGACGCA TACCGGCCGC CGCGGGCGCA GCGGATACTG 
TGGGACTTCC TGCCCGATCC GAACTTCGTC GCCGATCTCG GCCGCGGCTC GAATCACAGC 
CGCGGCACCG CGCTCGACCT GACGCTCGTC GACGCGAACG GCGACGCGCT CGACATGGGC 
ACGGGCTTCG ACGAGATGAT CGCCGCGTCG AATCATTTCC ACGACGGCCT GCCCGAGCCC 
GTGCAGCGCA ACCGGCTGCT GCTGCTCGGC GTGATGCACG CGGCGGGCTT CACGCACATC 
GCGAGCGAGT GGTGGCATTA CGAGCTGCCC GGCTCACGCG CGCTGCCGCT GATCGACGAA 
GAAGCGGGCG GACCGTGGCG GCTGATGTGA 

 

Protein sequence

MKTSAHRLVE IAPHTHGVDV DLVYATERNL TGQPIYRRAH CLLLEPAEAA LRRAVAVAAR 
SGLRLRIYDA YRPPRAQRIL WDFLPDPNFV ADLGRGSNHS RGTALDLTLV DANGDALDMG 
TGFDEMIAAS NHFHDGLPEP VQRNRLLLLG VMHAAGFTHI ASEWWHYELP GSRALPLIDE 
EAGGPWRLM