Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1311 |
Symbol | |
ID | 4903865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1237201 |
End bp | 1238802 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640144417 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_001075346 |
Protein GI | 126456310 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.251362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCT CGATGCCCAA GCTCGTCGCG GCGCTCGCCG CCGCTTCCGC GTTCGCGGCC GTCCCGGCCC GCGAAGCGCA CGCGGCGCCG CCGAAAGACC TGTTCGTGAT GGCCACGCTG CTCGACGAGT TCATCTCGCT CGATCCGGGT GAAATCTACG AGCTCGTGCC GGAGGAATAC GTCGCGAATA CATACGACCG GCTGGTGCGC GTCGATCTCG CCGATCCGTC GAAATTCAAC GGCGACGTCG CGCAATCGTG GAGCGTGAGT CCCGACGGCC TCACGTTCAC GTTCAAGCTG CGCGCGGGCC TCGCGTTCCA TTCGGGCAAT CCGCTCACGG CCGACGACGT CGCGTGGTCG CTCCAGCGCG CGGCGCTGCT CGACAAGGGG CCGGCCGCGG TGCTCGCGGG CATCGGCCTC ACGAAGGCGA ACGCGCTCGC GAACGTGAAG AAGCTCGACG CGCTGACGGT ATCCGTCACG ACCGACCGCA AGTACGCGCC GAGCTTCGTG CTGAACGTGC TCGGCTCATG GCCCGCGTCG ATCGTCGACA AGAAGCTGCT GCTGCCGCAC CAGCAGGGCG ACGATTTCGG CAACGGCTGG CTGAAGACGC ACGAGGCCGG CTCGGGCGCC TACCAGCTCG TCAAGTGGAC GGCGGGCGAC AGCATCGTGC TGCAGCGCTA CGACCGCTAC CGGCTGCCGC TCGCGATGAA GCGGATCGTG CTGCGCCACG TGCCCGAGGC GGCGAGCCAG CGGCTGCTGC TCGAAAGCGG CGATGTCGAC GCGGCGCGCG ACCTGAGCCC CGACGATCTC GCGGCCGTCG CGAACAGCGG CAAGGCGAAG GTGACGCCGT CGCCGCAGGC GACGCTGCTG TACCTCGGCC TCAACACGAA GAACCCGACG CTCGCGAAAC CGGAGGTTCA GCAGGCGCTG AAATGGCTCG TCGATTACGA CGGCATCCAG CGCCACGTCG TGAAAACGAC CTACCAGGTC CATCAGACGT TCATGCCGGA GGGCTTGCTC GGCGCGCTGA ACGCGAATCC GTACCGGCTC GACGTCGCGA AGGCGAAGGC GCTGCTCGCG AAGGCCGGCG TGCCGAACGG CTTCACGGTG ACGATGGACG TGCGCAACGA CTACCCGTAC ACCGAGATCG CGCAGGCGGT GCAGGCGAAC TTCGCGCAGG CGGGCGTCAA GGTGCAGCTG ATTCCCGGCG ACAACAAGCA GACGCTCGCG AAGTACCGTG CGCGCCAGCA CGACATCTAC ATCGGCGAAT GGTCGGCCGA TTACATCGAT CCGCACAGCA ATGCGCAGGG CTTCGCATGG AACCCGGATA ATTCGGATCA GTCCAGCTAC AAGATGCTCG CGTGGCGCAA CGCCTGGAAC ATCCCGCGAC TGACCGCGCA AACGGACGCG GCACTCGCGG AGCCTTCCGC CGCGAAGCGC GCGCAGTCAT ATCAGGCGAT GCAAAAGGAA GTGCTCGCGA AATCGCCGTT CGTGATCCTG TTCGAGAAAG TCGCGCAGGT CGCGACGCGG CCCGGCGTGA GCGGCCTCGA AGTCGGCCCG ATCAACGATC TCGTTTCATA TCGCAATCTG AAGAAGCAGT GA
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Protein sequence | MTLSMPKLVA ALAAASAFAA VPAREAHAAP PKDLFVMATL LDEFISLDPG EIYELVPEEY VANTYDRLVR VDLADPSKFN GDVAQSWSVS PDGLTFTFKL RAGLAFHSGN PLTADDVAWS LQRAALLDKG PAAVLAGIGL TKANALANVK KLDALTVSVT TDRKYAPSFV LNVLGSWPAS IVDKKLLLPH QQGDDFGNGW LKTHEAGSGA YQLVKWTAGD SIVLQRYDRY RLPLAMKRIV LRHVPEAASQ RLLLESGDVD AARDLSPDDL AAVANSGKAK VTPSPQATLL YLGLNTKNPT LAKPEVQQAL KWLVDYDGIQ RHVVKTTYQV HQTFMPEGLL GALNANPYRL DVAKAKALLA KAGVPNGFTV TMDVRNDYPY TEIAQAVQAN FAQAGVKVQL IPGDNKQTLA KYRARQHDIY IGEWSADYID PHSNAQGFAW NPDNSDQSSY KMLAWRNAWN IPRLTAQTDA ALAEPSAAKR AQSYQAMQKE VLAKSPFVIL FEKVAQVATR PGVSGLEVGP INDLVSYRNL KKQ
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