| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1309 |
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| Symbol | |
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| ID | 4904830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1235126 |
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| End bp | 1236067 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640144415 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_001075344 |
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| Protein GI | 126457693 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0351291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCT CACCCGATCA CTCCCGCACG AATCCCGCCG CGACGACGCT GCGCGCGTGG
CTGCTGTCCG ACGCGCCCGC CTCGCGCCGG CAGGCGACGC TCGGCCTCGC GTACCGCCGC
TGGCGCCGCT TCGCCGGCAA TCCGCTGAAC CTTCTCGGGC TCGCGATCCT CGCCGCGCTC
GTCGCGATCG CGCTCGTCGC GCCGTTCGTC ATGCCGCACG ACCCGCTGCG CCAGGTGCTC
GCCGACCGGC TGCTGCCGCC CGGCTCCCCG TCGCACTGGC TCGGCACCGA CCAGCTCGGC
CGCGACATCC TCTCGCGTCT GATCGCGGGC TCGCGGCTCA CGCTCGGCAT CGCGATCCTC
GTCGTCGCGA TCGTCGTGCC GATCGGGCTC GCGATCGGCA CGACGGCCGG CTACTGCGGC
GGCCTCGTCG ACAGCGCGCT CATGCGGATC ACCGACGTCG CGCTCGCGTT CCCGAAGATC
GTGCTCGCGC TCGCGTTCGC GGCGGCGCTC GGGCCGGGCG TCGTCAACGC GGTCGTCGCG
ATCTCGATCA CCGCGTGGCC CGCGTACGCG CGGCTCGCGC GCGCGGAGAC GCTGCGCATC
GCGAACGCGG ACTTCATCCA CGCGGCGCGG CTGCAAGGCG CGTCCGATCT GCGGATCGTG
CTGCGCTATG TCATGCCGCT CTGCCTGTCG TCGGTGATCG TGCGCGCGAC GCTCGACATG
GCGGGCATCA TCCTGACCGT CGCCGGCCTG GGCTTTCTCG GGCTCGGCGC GCAGCCGCCG
AGCCCCGAAT GGGGCTTCAT GGTCGCATCG GGCCGCAACG TGCTGCTCGA CGCATGGTGG
GTCGCGACGC TGCCCGGCGC GGCGATCCTC GTCGTCAGCA TCGCGTTCAA CCTGCTCGGC
GACGGTCTGC GCGACGTCTT CGATCCACGC CATGGAGCCT GA
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| Protein sequence | MNASPDHSRT NPAATTLRAW LLSDAPASRR QATLGLAYRR WRRFAGNPLN LLGLAILAAL
VAIALVAPFV MPHDPLRQVL ADRLLPPGSP SHWLGTDQLG RDILSRLIAG SRLTLGIAIL
VVAIVVPIGL AIGTTAGYCG GLVDSALMRI TDVALAFPKI VLALAFAAAL GPGVVNAVVA
ISITAWPAYA RLARAETLRI ANADFIHAAR LQGASDLRIV LRYVMPLCLS SVIVRATLDM
AGIILTVAGL GFLGLGAQPP SPEWGFMVAS GRNVLLDAWW VATLPGAAIL VVSIAFNLLG
DGLRDVFDPR HGA
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