| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1300 |
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| Symbol | |
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| ID | 4906303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1228558 |
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| End bp | 1229526 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640144406 |
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| Product | putative peptidoglycan-binding LysM/M23B peptidase |
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| Protein accession | YP_001075335 |
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| Protein GI | 126457251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGAG TTGTCTCGAG CATGAGCAAG AGCGAGATCG ACCGCAGTGT CGCATGGTTG
TCCGGCGTGG CGGCCGCGTT CGTCGTCGCG GGCTGCGCAA CCACGTCGCC CGTCACGCCG
ACTGATACGC TCGCGGCCGC CGCGTCTTCG GCGAGCGCCG CGCAGCCCGC GGCCGCGCCG
CCGGGCGACG CGGCGCAGCA TCCGGAGCAC GCCGCCGCGC CGGCGCCGAT CGCGACACGC
TACGTCGTGA GGCGCGGCGA TACGCTGTCG GCGATCGCGC AAGCGAACGG CTGCACCGTG
CGCGAGCTGC AGGCCTGGAA CCGGATGGGC CGGCGCACCC GGATCGGCAT CGGCCAGGTA
TTGCGGATCG CGCCGCCGGG TGCGGAAAAC GCGGTCGCCT CCGAGGCGGC GGATGGCGCG
GGCGCGACCC GCGCGGCCGG CAATGCAGCC GGCGCCGCGC GCGCGGCCGA TCCGGCGAGC
GGCGCGGGCG GGGCGCCTGT CGCCGATGCG CCGCAGCCTG CATCGGCGCC CGAAAGCGCC
GCGGACCGGG TGGCGGACCA TCGGGTCGTC CAGGAAACGA AGCGGCACGC GCAATCGATC
GCGCTCGCGT GGCCGGCGAA GGGCGCGGTC GTCGAAACGT TCCAGCCCGG CCGCAATCGC
GGCATCCGGA TCGTCGGGCG CGCGGGCGAT CCGGTGCGTG CCGCGGCGTC CGGCCGGGTG
ATGTACGCGG GCACGGGCCT GAACGGGTAC GGCACGCTGA TCCTGGTCCA GCACAACGCG
GATTTTCTGA CCGCTTACGC GCACAACCGC AAGGTGCTCG TGAAGACGGG CGACGTCGTT
CAGCAGGGCG AACAGATCGC CGAGATGGGC ACCGGCGACA GCACGCGCGC CGGCATGCTG
TTCGAGGTGC GGCGCGACGG CAAGCCCGTC AATCCGATGC CGTATCTGGC GAGCCGGCAG
CAGGGCTAG
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| Protein sequence | MTGVVSSMSK SEIDRSVAWL SGVAAAFVVA GCATTSPVTP TDTLAAAASS ASAAQPAAAP
PGDAAQHPEH AAAPAPIATR YVVRRGDTLS AIAQANGCTV RELQAWNRMG RRTRIGIGQV
LRIAPPGAEN AVASEAADGA GATRAAGNAA GAARAADPAS GAGGAPVADA PQPASAPESA
ADRVADHRVV QETKRHAQSI ALAWPAKGAV VETFQPGRNR GIRIVGRAGD PVRAAASGRV
MYAGTGLNGY GTLILVQHNA DFLTAYAHNR KVLVKTGDVV QQGEQIAEMG TGDSTRAGML
FEVRRDGKPV NPMPYLASRQ QG
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