| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1266 |
|---|
| Symbol | |
|---|
| ID | 4905624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 1198385 |
|---|
| End bp | 1199692 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640144372 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001075301 |
|---|
| Protein GI | 126458142 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGATC GATATCGACG ACACGCTGAC ATGATGAATA AAAAGCCCCT GAGCCTGACG
CAAATCGTGC TCGCGACTTC GGTCGGCAAC GCGCTCGAAT GGTTCGATAT CGCCATTTAT
GCGTTCTTCG CCGTGCATAT CGCGAAGAAT TTCTTCCCGA CCGCGAACGA GACGGCGTCG
ATGCTGCTCA CGTTCGGCTC GTTCGGCGCG TCGTATCTCG TGCGGCCGAT CGGCGGCATG
GTGCTGGGCG CCTACGCGGA CAAGCGCGGG CGCAAGGCGG CACTGATGAT GTCGGTCGGT
CTGATGATGA TCGGCACGGC GATCATCGCG GTGATTCCGC CACATGCGTC GATCGGCCTG
CTCGCGCCAG CAGGCGTGTT CATCGCACGG CTGATTCAGG GTTTTTCGGC GGGCGGCGAA
TTCGGCGCTT CGACGGCGAT GCTGATCGAA CATGCACCCG AGCGTCGCGG CCTGCTCGCA
AGCTGGCAGT TCGCGACGCA AGGCCTCGCG ACCCTGCTCG CGTCGACCTT CGGCTTCGCG
CTCGCCAAGC TGATGCCCGC CAGCGAGCTC TCCGCATGGG GCTGGCGCAT GCCGTTCTTC
TTCGGGCTGC TGATCGGGCC GGCGGGTCTG TATCTGCGAC GCTTTCTCGA AGATGCGGCC
GATTACACCG AAGCCGAGCA CACGGCCACG CCGGTGCGCG ATGTACTCAC GCGGCAGAAG
GCGTTGCTGC TGACCTCGAT CGGTGCGCTG ACGGTGTCGA CGGCGGTGAA CTACCTGTTG
CAGTACGTGC CGACGTTCGC GATCCGCGAA TTGCATCTCG ATGCATCGAC GGGTTTCGCC
GCGAGCATCG TCGCGGGGCT GATGCTGACC TTGGTCACGC CGTTCGCGGG GCATCTGTCC
GACAAAATCG GCCGCGTGAA GCAGATGTCG ACTGCGGCGC TGCTACTGTT CGTGACGGGT
TATCCGGCGT TCGCGTATGT CGTGTCGCAT GTGTCGGTAG CGGCGTTGTT CGGGCTCGTC
GCGTGGCTTG CGCTGCTCAA GGCGGTGTAT TTCGGCGCGC TGCCGGCGCT CATGTCGGAG
ATTTTCCCCA CATCGACGCG CGTGACGAGC ATTTCAATCA GCTACAACAT CGGCGTGACG
GTGTTCGGCG GTTTTACGCC GGCGATCGTC ATCTGGCTGT CGAGCGCGAC GGGCAGCAAG
GCGGCACCGA GCTTCTACAT GATGTTCACG GCCGTGATCA GTCTCGCGGC GCTGGCGGCA
GTGAGCCGCG GGAAAGAGCC GCTGAGCTCG GCGGGCACGG CGGCCTGA
|
|---|
| Protein sequence | MTDRYRRHAD MMNKKPLSLT QIVLATSVGN ALEWFDIAIY AFFAVHIAKN FFPTANETAS
MLLTFGSFGA SYLVRPIGGM VLGAYADKRG RKAALMMSVG LMMIGTAIIA VIPPHASIGL
LAPAGVFIAR LIQGFSAGGE FGASTAMLIE HAPERRGLLA SWQFATQGLA TLLASTFGFA
LAKLMPASEL SAWGWRMPFF FGLLIGPAGL YLRRFLEDAA DYTEAEHTAT PVRDVLTRQK
ALLLTSIGAL TVSTAVNYLL QYVPTFAIRE LHLDASTGFA ASIVAGLMLT LVTPFAGHLS
DKIGRVKQMS TAALLLFVTG YPAFAYVVSH VSVAALFGLV AWLALLKAVY FGALPALMSE
IFPTSTRVTS ISISYNIGVT VFGGFTPAIV IWLSSATGSK AAPSFYMMFT AVISLAALAA
VSRGKEPLSS AGTAA
|
|---|
| |