| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1264 |
|---|
| Symbol | |
|---|
| ID | 4903726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1195917 |
|---|
| End bp | 1196870 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640144370 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001075299 |
|---|
| Protein GI | 126457784 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGG AAAGCGTCGT GCTGCATGGC ATCGGGCTCA AATACTTCGT GGAAGTCGCG
CGCACCGGCT CGCTCGCAGC GGCATCGCAA CAGCTTCACG TCGCGGTGTC GGCGATCAGC
CGGCAAATCG CAAAGCTCGA GGAGCAGGTG GGCACGCCAC TGTTCGAGCG CATGCCGCGC
GGCATGATCC TGACCGAAGC GGGCGAATTG CTCGTGCAGC ATGCGCGCCG CGCGCTGATG
GATGGTGACG CGGTGCTTGC CGAGATATCG GAAATACATG CGCTCGGGCT TGGGATCGTG
CGCATCGGCT GCACGGAGGG TTTCACGCGC TGTTTTCTGC CGAGCGTCAT GGCGACGCAC
TATCGCCAGC ATCCGCGCAC GCGCTTCGTG ATGCGCTCAG GTACGCCCGC GCAGGTCGAG
CATTGGGTGG CAAGCGGCGA AGTCGATATG GGCCTCGCAT TTTCGACGTC GACATCGACG
GCGTTGAGCG TCGAATACAG CGTCAAGGCG CCCGTCTGTG CGCTGCTGCC GCCGACACAT
CCTTTGGCGG GAAGAACGAG CGTCACGCTC GACGACATTC TTCAGTACCC CACCGCCGTG
CTAGATCGGG GCACCACCGT GCGCCAGTTG ATCGACTTGT GCTGTTCGGC ACGCGGCGTG
CATCTGGAGC CCATTCTGAC GAGCAACAAC TCGAGCGCGA TGCACCATTT CGCCGCGCTC
GCCGGCACGA TCACCCTCGG CAGCCAGGTC GCGCTCGAAG GCAATCCCGG GCCCCCGACA
CTCGTCGCCA TGCCCATCGA CGAGCCATTG CTCAATGAGC GCCTTTTGCA GGTCACGGTG
ATGCGTGAGC GCCGCCTTCC GCCAGCGGTC GTTCAGTTTC TGAAAACGCT GTCGAATGCG
TTGCGCGAGA GTCAGGGCGC ATCCGCGGCG CGCGCCAGGA GAAAAAAACG CTAA
|
|---|
| Protein sequence | MLKESVVLHG IGLKYFVEVA RTGSLAAASQ QLHVAVSAIS RQIAKLEEQV GTPLFERMPR
GMILTEAGEL LVQHARRALM DGDAVLAEIS EIHALGLGIV RIGCTEGFTR CFLPSVMATH
YRQHPRTRFV MRSGTPAQVE HWVASGEVDM GLAFSTSTST ALSVEYSVKA PVCALLPPTH
PLAGRTSVTL DDILQYPTAV LDRGTTVRQL IDLCCSARGV HLEPILTSNN SSAMHHFAAL
AGTITLGSQV ALEGNPGPPT LVAMPIDEPL LNERLLQVTV MRERRLPPAV VQFLKTLSNA
LRESQGASAA RARRKKR
|
|---|
| |