Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1248 |
Symbol | |
ID | 4904159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1184562 |
End bp | 1185392 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640144354 |
Product | ompA family protein |
Protein accession | YP_001075283 |
Protein GI | 126456472 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA ACAGGATGTC GAAATATGCG GCCGCCGCCG GGATCTGCGC GGCGCTGCTG ACGGGATGCG GAATGGCGCC GACGAGCGCG CCGGACGGCT CGGTCGGGTT TCCGGCGCGC GACAGCGCGT GGCTGAAGGA AGGCACGTTC GTGAATGTCG AGAACCTGCG CCAGATCGGG CCCGGTCTCG ACAAGAACCA GGTCTATGCA CTGATCGGCG AGCCGCACTT CAGCGAGGGC ATCATCGGCG TGCACGTGTG GAACTATGTA TTCAATTTCC GCACGGGGCC GGGGGCGAGC GATGTCGTGA CGTGCCAGTA CCAGATCCAG TACGACAAGC ACTATCGCGT GAAATCGACG TACTGGAAGG AGCCGGCGTG CAAGGCGCTC GTCGACGGCC CGAAGCCGGC GCCCGCCGTG CAGGCGCCGC CGGGCGACGA CGTGAAGCAG TTCACGCTCG ATTACCAACT GCTGTTCCCG TTCGACAAAT CGGCGCTGCG CGACCTGCTG CCGGCCGGGC GGGCCGAACT GGACCGGATC GCGGCCACGC TGGAGCAGCA GTACCAGCAC ATCCGCTCGG TGCGGGTCAC GGGCTACACC GACCGGCTCG GCACGGACGC ATACAATCGG CAGCTGTCGC TCGCGCGGGC CGAAACGATT CGTGCGTATC TGACGACGCG CGGCCTGCCC GGCGATCTGA TCGTCGCGCA GGGGCTCGGC AAAGCCGATC CGGTGAGCAA CGGCTGCCCC GCCGGGCGTT CGGCGGAGGC GATCGCGTGT CTCGCGCCGG ACCGGCGCGT GAGGATCGAC GTCGCCGGCG AACGGCGCTA G
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Protein sequence | MKMNRMSKYA AAAGICAALL TGCGMAPTSA PDGSVGFPAR DSAWLKEGTF VNVENLRQIG PGLDKNQVYA LIGEPHFSEG IIGVHVWNYV FNFRTGPGAS DVVTCQYQIQ YDKHYRVKST YWKEPACKAL VDGPKPAPAV QAPPGDDVKQ FTLDYQLLFP FDKSALRDLL PAGRAELDRI AATLEQQYQH IRSVRVTGYT DRLGTDAYNR QLSLARAETI RAYLTTRGLP GDLIVAQGLG KADPVSNGCP AGRSAEAIAC LAPDRRVRID VAGERR
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