| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1240 |
|---|
| Symbol | ilvB |
|---|
| ID | 4904260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 1173823 |
|---|
| End bp | 1175496 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640144346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001075275 |
|---|
| Protein GI | 126456256 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACC CAACCACGAC CACGGTCGGC GAGCTGATTG CCGCCTTCCT CGAACAATGC
GGCGTGAAGA CCGCCTTCGG CGTGATCTCG ATTCACAACA TGCCGATCCT CGACGCGATC
CACACGCGCG GCAAGATCCG CTATGTCGGC GCGCGCGGCG AGGCGGGCGC CGTCAACATG
GCCGACGGCC TCGCGCGCGT GTCGGGCGGG CTCGGCGTCG CGTTCACGAG CACGGGCACC
GCGGCGGGCA ACGCGGCGGG CGCGATGGTC GAGGCGCTGA CGGCCGGCAC CGCGCTCGTG
CACATCACCG GGCAGATCGA GACGCCGTAC CTCGATCAGG ACCTCGCGTA CATCCACGAA
GCGCCCGATC AACTGTCGAT GCTCAACGCG ATCTCGAAGG CCGCGTATCG CGTGCGCACG
GTCGAAACCG TGCTGCCGAC GATCCGCGAG GCGGTGCGCG TCGCGATGAC CGCGCCGAGC
GGGCCCGTGT CGGTCGAAAT TCCGATCGAC ATCCAGGCGG CCGAAATCGA GTGGCCGGAC
GATCTCGCGC CGCCTCACGT GGCGGTGCGC GAGCACGACA GCGCGCGCGT CGCGCAGCTC
GCCGAGCGTC TGGCGGGCGC GCGCCGGCCG CTGCTGTGGC TGGGCGGCGG CGCGCGGCAC
GCGCGCGCGG AAGTCGAGCG GCTCGTCGCA CTCGGCTTCG GCGTGGTCAC GAGCGTGCAG
GGGCGCGGCG TGCTGCCGGA GGATCACCCG GCGACGCTCG GCGCGTTCAA CGTGCACGCG
GCCGTCGAGC ACTTCTACAA GACGTGCGAT GCGGTCGTCG TCGTCGGCTC GCGGCTGCGC
GGCAACGAGA CGCTGAAGTA CAAGCTCGCG CTGCCGCGTC CGTTGTTCCG CGTCGACGCC
GACGCGCTCG CCGACAACCG CGGCTACCGC AACGATCTGT TCGTGCACGG CGACGCGAAG
CGCGTGCTCG CGGAGCTCGC GGATCGGCTC GAAGGCCGGC TCGCGATCGA CCCGCGCTTC
GCCGACGATC TCGCGGCCGC GCGCGCGGCG GCCGTCGCCG ACGTCGGCAA GGGGCTCGGC
CCGTACAAGC GCCTTGTCGA CACGCTGCAG CAGGCGCTCG GACGCGACTA CAACTGGGTG
CGCGACGTGA CGATCTCGAA CAGCACGTGG GGCAACCGCC TGCTCAGGAT CTTCGAGCCG
CGCGCGGGCG TGCACGCGTT GGGCGGCGGA ATCGGCCAGG GGATGCAGAT GGCGATCGGC
GCGGCGCTCG CCGGCAACGC GGCGAAGACG GTGTGCCTCG TCGGCGACGG CGGCCTGATG
GTCAACGTCG GCGAGCTCGC GACCGCCGTG CAGGAGAACG CGAACGTGAT GATCGTGCTG
ATGAACGACC AGTGCTACGG GGTGATCCGC AACATCCAGG ACGCGCAGTA CGGCGGGCGG
CGCTGTTACG TCGAGCTGCA TCAGCCGGAT TTCGCGCAGT TCTGCGCGAG CCTGAAACTC
GCGCATCACC GGATCACGTC GCTCGACGAC GCGGAGCGCA TCGTGCGCGA GGGGCTCGCG
CACGAGGGGC CGGTGCTCGT CGAAGTCGAC ATGCTGTCGG TCGGCTCGTT CGCGGCCGCG
TTCGCCGGCC CCCCCGTCAA AAAGGACACG CCCGCGGAGC GCCAGTATGC GTAA
|
|---|
| Protein sequence | MSNPTTTTVG ELIAAFLEQC GVKTAFGVIS IHNMPILDAI HTRGKIRYVG ARGEAGAVNM
ADGLARVSGG LGVAFTSTGT AAGNAAGAMV EALTAGTALV HITGQIETPY LDQDLAYIHE
APDQLSMLNA ISKAAYRVRT VETVLPTIRE AVRVAMTAPS GPVSVEIPID IQAAEIEWPD
DLAPPHVAVR EHDSARVAQL AERLAGARRP LLWLGGGARH ARAEVERLVA LGFGVVTSVQ
GRGVLPEDHP ATLGAFNVHA AVEHFYKTCD AVVVVGSRLR GNETLKYKLA LPRPLFRVDA
DALADNRGYR NDLFVHGDAK RVLAELADRL EGRLAIDPRF ADDLAAARAA AVADVGKGLG
PYKRLVDTLQ QALGRDYNWV RDVTISNSTW GNRLLRIFEP RAGVHALGGG IGQGMQMAIG
AALAGNAAKT VCLVGDGGLM VNVGELATAV QENANVMIVL MNDQCYGVIR NIQDAQYGGR
RCYVELHQPD FAQFCASLKL AHHRITSLDD AERIVREGLA HEGPVLVEVD MLSVGSFAAA
FAGPPVKKDT PAERQYA
|
|---|
| |