Gene BURPS1106A_A1236 details

Gene Information

• Locus tag: BURPS1106A_A1236
• ID: 4903294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1170736
• End bp: 1171263
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640144342
• Product: cupin domain-containing protein
• Protein accession: YP_001075271
• Protein GI: 126457910
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0662] Mannose-6-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACG CCGATATCGA GCGTAAATCG TGGGACCAGC CGGCGGGCGA AAGCTTCGCC 
CAATGGATGG ACGGGCGCGT CGCGCGCTTC GAAACGCGCC GTTACGACTG GGACGCGCTG 
AAGTTCCAGG CCGATTTCGA TCCGAAATAC CGCCGCGCGC AAATGCGCTA CGTGGGCACG 
GGCGGCACGG GCGTCGCGAA GGACGCGAAC ACGGTGCCCG CGGGCGGCTT CACGTTTTCG 
ACGATGGTGA TTCCGGCCGG CAACGTCGGC CCGAGCCACA TTCACATCGA CGTCGAGGAA 
ATCTTCTTCG TGCTGCGCGG CCGGATGAAG GTGATCTGCG AGCGTGACGG CGAGACGTGG 
GAGGCGGTGC TCGGCGAGCG CGATCTGATC TCGGTGCCGC CGGGTGTCTA TCGGACCGAA 
ATCAACGTCG GTGAGGAAGA CGCGCTGATG TGCGTGATGC TCGGCTCGCC GAAGCCGATC 
ACGCCGACGT ATCCGCCGGA TTCGCCGCTC GCGAAGATCA AGCGCTGA 

 

Protein sequence

MADADIERKS WDQPAGESFA QWMDGRVARF ETRRYDWDAL KFQADFDPKY RRAQMRYVGT 
GGTGVAKDAN TVPAGGFTFS TMVIPAGNVG PSHIHIDVEE IFFVLRGRMK VICERDGETW 
EAVLGERDLI SVPPGVYRTE INVGEEDALM CVMLGSPKPI TPTYPPDSPL AKIKR