Gene BURPS1106A_A1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1228 
SymbolalkB 
ID4905840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand+ 
Start bp1164696 
End bp1165322 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content72% 
IMG OID640144334 
Product2OG-Fe(II) oxygenase family oxidoreductase 
Protein accessionYP_001075263 
Protein GI126456592 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATT TGTTCGACGA TCTGCCGAGA CCCGATGCCG ACTGGCATCC GGACTGGCTC 
GCGCCCGCCG ACGCCGACCG CTTCCATGCG CGCCTCGTCG ACGAGGTCGC GTGGCGCCAG 
GACACGATGC GCACGCCGCG CGGCCTGTTG CCGCTGCCGC GCCTGACCGC GTGGCAGGGC 
GAGCCGGACG CGCTCTACGT GTATTCGGGC ATCCGCAACG AGCCGGCGCC CTGGACGCCC 
GCCGTGCTCG AGCTGAAGCG AAGGGTCGAG GCGGCGAGCC GCGCGCGCTT CAACAGCGTG 
CTGCTGAACC GCTATCGCAA CGGCTTCGAC AGCATGGGCT GGCATGCGGA CGACGAGCCG 
GAGCTCGGCG CCGAGCCGGT GATCGCGTCG CTGAGCCTCG GCGCGACGCG GGTGTTCGAT 
CTGCGGCACA ACGAGACGGG CGTGACGCAC GCGTATCGTC TGACGAACGG CAGCCTGCTC 
GTGATGCGCG GGCGCACCCA GCACGCATGG CGGCACCGCG TGCCGAAGGA GCCCGCGGTA 
CGGGGCGAGC GGATCAACCT GACGTTTCGC TGGGTGAGCG CGCCGCCCGC CGCCGAGCGC 
CGCGCGAGGC CGCGTTCGCG CGGATGA
 
Protein sequence
MDDLFDDLPR PDADWHPDWL APADADRFHA RLVDEVAWRQ DTMRTPRGLL PLPRLTAWQG 
EPDALYVYSG IRNEPAPWTP AVLELKRRVE AASRARFNSV LLNRYRNGFD SMGWHADDEP 
ELGAEPVIAS LSLGATRVFD LRHNETGVTH AYRLTNGSLL VMRGRTQHAW RHRVPKEPAV 
RGERINLTFR WVSAPPAAER RARPRSRG