| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1163 |
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| Symbol | |
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| ID | 4906110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1110583 |
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| End bp | 1111923 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640144269 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_001075198 |
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| Protein GI | 126457457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.151971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGTC GCGCCGATGC GTCGGCTTCG GCGTATCGCT TCGAGACACT GCTTCGAGAC
ACCGCTTCGG CGCATCGCCT GCGCGCATCG CACGCGTGTC CTTCCTCCGT CCCGTTCACC
CAGAGTCTGC CCATGCCCGC ACGTTCCGCT TCCTCGCCCC GTCCGCCGAT TCCGCGCACC
GTATGGGCGC TCGGCTTCGT CAGCCTGTGC ATGGATGTGT CGTCGGAGCT GATCCACGCG
CTGCTGCCGA TCTATCTCGT GACGACGATG GGCATGAGCG TCGCGGCGCT CGGCGTGCTC
GAAGGCGCGG CCGAGGCGAC CGCGATGATC GTCAAGATCT TCTCCGGCGC GCTCAGCGAT
TGGCTGGGCC GGCGCAAGGC GCTGCTGCTG CTCGGCTACG GGCTCGCCGC GCTGACGAAG
CCGCTCTTTC CGCTCGCGGC AGGGCCGGCG ACGGTCGCCG CCGCGCGGCT GCTCGATCGC
GTCGGCAAGG GCATTCGCGG CGCGCCGCGC GATGCGCTCG TCGCCGATGT CGCGCCGCCC
GAGATCCGCG GCGCGTGCTT CGGGCTGCGC CAGTCGATGG ACACCGTCGG CGCGTTCGCG
GGGCCGCTGC TCGCGATCGC GCTGATGCTC GCGTTCGCCG ATCACATCCG CGCGGTGCTG
TGGTTCGCGG TCGTGCCGGC GTTCGCCGCG GTCGCGCTGA TCCTGTTCGG CGTCGAAGAG
CCCGCGTCCG CGCCCGCCGC CGCGCGGGCG TTCCGCTCGC CGCTGCACTG GCGCGCGCTG
CGCGCGTTTT CCGGTCGCTA CTGGTTCGTC GTGCTGATCG GCACCGCGTT CACGCTCGCG
CGCTTCAGCG AGGCGTTCCT CGTGTTGCGC GCGCAGCAGG TGGGGCTCGA CATCGCATGG
ATCCCGGCCG TGATGGTCGT GATGAGCATA GCGTACGCGG CGTCCGCGTA TCCGGTCGGC
ATCGTGTCCG ACAAGTTCGG CGCGCGCGCG CCGCTCGCGG CCGGCATGCT GCTGCTGATC
GCGGCCGATC TGCTGCTGGG CGCGAGCGCG TCGCGCACGG CGCTGTTCGC GGGCGTCGCC
GTTTGGGGGC TGCACATGGG TTTCACGCAG GGCATGCTCG CCGCGCTCGT CGCGCAAACC
GCGCCGGCCG CGCTGCGCGG CACCGCGTTC GGCGTGTTCA ATCTCGCGGG CGGGATCGCG
ATGCTCGCGG CGAGCGCGCT CGCCGGCTGG CTGTGGGAAC ACCACGGCGC GCCGACGACG
TTCTTCACCG GCGCGGCGCT CGCGGCCGTC GCACTCGCGA TGTGCGGATT CGTTCGGCGG
CGCCCGGGGC CTGCGGCATG A
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| Protein sequence | MPRRADASAS AYRFETLLRD TASAHRLRAS HACPSSVPFT QSLPMPARSA SSPRPPIPRT
VWALGFVSLC MDVSSELIHA LLPIYLVTTM GMSVAALGVL EGAAEATAMI VKIFSGALSD
WLGRRKALLL LGYGLAALTK PLFPLAAGPA TVAAARLLDR VGKGIRGAPR DALVADVAPP
EIRGACFGLR QSMDTVGAFA GPLLAIALML AFADHIRAVL WFAVVPAFAA VALILFGVEE
PASAPAAARA FRSPLHWRAL RAFSGRYWFV VLIGTAFTLA RFSEAFLVLR AQQVGLDIAW
IPAVMVVMSI AYAASAYPVG IVSDKFGARA PLAAGMLLLI AADLLLGASA SRTALFAGVA
VWGLHMGFTQ GMLAALVAQT APAALRGTAF GVFNLAGGIA MLAASALAGW LWEHHGAPTT
FFTGAALAAV ALAMCGFVRR RPGPAA
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