| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1140 |
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| Symbol | cefD |
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| ID | 4904621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1093342 |
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| End bp | 1094499 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640144246 |
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| Product | isopenicillin N epimerase |
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| Protein accession | YP_001075175 |
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| Protein GI | 126458625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCC CACTGAAATC GTTGTTTCTT CTCGACCCGA GCGTGACCTA TCTGAACCAC
GGCGCGTACG GCGCGACGCC GCGCCCGGTG TTCGAGCGCC ACGTGCAGTG GCAGTACGAG
CTCGAACGCG AGCCGGTCGA TTTCCTGTCG CGCCGCTTCG CCGAACGCAT GGCGCAGGCG
AGGGCGATAC TGGCCGAATA CGTGGATACC GAACGCGACA ATCTAGTATA TGTGAGCAAC
GGCACCACGG GCGTGAACAT CGTCGCGCGC AGCCTCCCGC TCGGCCCGGG CGACGAACTG
CTCACCACCG ATCACGAGCA CGGCGGCATC GAGCGGCTGT GGCGCTTCAC CGCGCAAAAG
CGCGGGTTCG AGATCGTCCG GCACAAGGTG TCGCTGCCGG TGACGACGCA TGCCCGGTTC
GTCGAGGATT TCTGGCGCGA CGTGACGCCG CGCACGCGCG CGATCCTGAT CAGCCAGCTG
ACGTCGCCCA CCGCGCTCGT GTTTCCGGTT GCGGCGATCT GCGCGCGCGC GCGGGCGCGC
GGCATCCTGA CGATCGTCGA CGGCTCGCAC GTGCCCGGGC AACTGCCGCT GTCGCTGCGC
GAGATGGATC CGGATTTCTA TGTCGGCATC CTGCATAAAT GGGTGTGCGC GCCGAAGGGC
AGCGCGTTCC TGTATGCGAG GCCGGACGTG CAGCCGCTTG TCGAGCCGCT CGTCGTCAGT
TGGGGCTGGG AGCCGAAGAA CCCGGGGCCG TCGAAGTTCG TCGAGTATCA CGAGTGGCAG
GGCAGCCGCG ACATCTCCGC GTTCCTGAGC GTGCCGAGCG CGATCGCGTT TCAGCGCGAG
CACGACTGGG ACGGTGTGCG CAAGCGCTGC ATCGCGCTCG CGAGCGACGC GCAGCGCGAA
GTGGCCGCGT TGACGCGCGA GCCGCTCTAC CATCCGCCGG GCGCGCACGA GTGGCACGGC
CAGATGGTCT GCGCGCAACT GCCGCCGCAG ACGGACGACA TCGCGCTGCT TGCCCGCTTG
CGCAACGAAT GCGGGATCGA CGTCTCGGTC GACCGTTTCG GCGGCCGGCC TCGCATCCGA
GTGTCGATTC AGGGCTATAA CGGCCCGGAC GACGTCGATC GATTGCTCGG CAGTCTGAAG
CAACTGCTGC GGCTTTGA
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| Protein sequence | MTAPLKSLFL LDPSVTYLNH GAYGATPRPV FERHVQWQYE LEREPVDFLS RRFAERMAQA
RAILAEYVDT ERDNLVYVSN GTTGVNIVAR SLPLGPGDEL LTTDHEHGGI ERLWRFTAQK
RGFEIVRHKV SLPVTTHARF VEDFWRDVTP RTRAILISQL TSPTALVFPV AAICARARAR
GILTIVDGSH VPGQLPLSLR EMDPDFYVGI LHKWVCAPKG SAFLYARPDV QPLVEPLVVS
WGWEPKNPGP SKFVEYHEWQ GSRDISAFLS VPSAIAFQRE HDWDGVRKRC IALASDAQRE
VAALTREPLY HPPGAHEWHG QMVCAQLPPQ TDDIALLARL RNECGIDVSV DRFGGRPRIR
VSIQGYNGPD DVDRLLGSLK QLLRL
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