| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1126 |
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| Symbol | pbpC |
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| ID | 4903292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1074528 |
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| End bp | 1077269 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640144232 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001075161 |
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| Protein GI | 126456271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0888315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGTCGA CGCTCGCGCG GCGGGCCGCG CAGGCGGCCG TGCCGCGATG GGTTTGGCCG
TTCGCCCGAC CGGCCGGGTG GTCGCTCGGT CCGGTGTTCG GTCCGGTGTT CGGTTCGGTG
TTCGGTCCGG CGTTCGGTCC AGCGTTCGGT CCGGCGTTCG GTCCGGCGTT CGGTTCGGCG
TTCGGTCCGG CGTTCGGTTC GGCGTTCGGT TCGGCGTTCG GTTCGGCGTT CGCGGCGTTC
GGTCTCGCGC TCGCCCCCCT GCTCGCCGCG CCGCCCGTTC GGCCGCGCGC CCGGCGGAAC
CCGCGCCCGT GCGGCTCGCC GCGGCGCGCG GCGCTCCCGC GCGCGCGAAC GGCGGCGAGC
CGCACGCTCG CCGTCGCGAT GCTCGCCGCG CCGCTCGCCG CGCACGCGCT GCCGGCCTAC
GACGACGTGC GGCGCGACTG GCGCAGCACC GACTGGTTGC TGCTCGCACG CGACGGCACG
CCGCTTCAGC GCACGCGCGT GGAGCTCACC GAGCGGCGCG GCGACTGGAT CGCGCTCGCC
GACGTATCGC CCGCGTTTCG AGAGGCGATC GTCGTATCGG AGGACAAGCG CTTCTACGCG
CACAGCGGCG TCGACTGGCG CGGCATCGCG GGCGCCGCAT GGGGCAATCT GTGGAACGAG
CGCACGCGCG GCGCGTCGAC GGTGACGATG CAGCTCGCCG GCCTGCTGAG CGACACGCCG
CGCCGCTCGG GCCAGCGCTC GCTGCCGCAG AAGGCCGCGC AGGCGATGAA CGCGCTGCGG
CTCGAACGCG GCTGGCGCAA GGATCAGATC CTCGAGGCGT ATCTGAATCT CGTGCCGTTT
CGCGGCGAGA CGGTCGGGCT CGACGCGATG TCGCACGCGC TGTTCGGCAA GGCGCCGTCG
GGGCTCGACG TGCGCGAATC GGCGGTGGCC GCCGCGCTCG TGCGCGCGCC GAACGCGTCC
GCCGCGAAAG TGGCCGAACG CGCGTGCCGG ATCCTGCGCG ACCTGCGCGC CGCGCAGCCG
TGCGAATCGC TCGACGGCTA CGTGCGCTTC GTGACGTCCG CCCCGCCGGG CGCCGCGCGC
GACGGCGGCG AAGCGCTCGC GCCGCACTTC GCGCGGCGCG TCGCGGCCGA GGTGAAGCCC
GGCGCGGGCG CGCGCGTGCG CTCCACGCTC GACGCGCCGC TGCAGCGCTT CGCGCGCGAC
ACGCTCACGC GCGCGCTCGC CGAGCTCAAC GCGCCCGCCC ATCGGCGCCA CGTGCAGGAC
GGCGCGGTCG TCGTGATCGA CAACGCGACG GGCGAGATCC GCGCATGGGT CGGCTCGTCG
GGCGCGCTGT CGGCCGCGCG CGACGTCGAC GCGGTGCTCG CGCCGCGCCA GGCCGGCTCG
ACGCTCAAGC CGTTCCTCTA CGCGCAGGCG CTCGACGAAC GGCGCCTCAC CGCCGCTTCG
CTGCTCGACG ACGCGCCGAT CGATCTCGCC GCGGGCGGCG GCCTGTACAT CCCGCAGAAC
TACGACAAGC ACTTCAAGGG CTGGGTCAGC GTGCGCACCG CGCTCGGCGG ATCGCTGAAC
GTGCCGGCCG TGCGCACGCT CGTGCTCGTC ACGCCGCACC GCTTCGCGCG CACGCTCACC
GCGCTCGGGC TGCCGCTCGC CGAAGAAGGC GATTACTACG GTTTCAGCCT CGCGCTCGGC
AGCGCCGACG TCACGCTGCT GTCGCTCGCG AACGCGTACC GCGCGCTCGC CAACGGCGGC
GTCGCGCGGG CGACGCTCGA CGTGCCGGGC GGAAGCGGAA GCCGGAACGG AAACGGAAAC
GGAAATGACG CCGTCACGTC GGCCCCGTTC GCGCCGGCCG TTTCGAAATC GAAGGTTGGC
GCGTCAGCGG TTTTCCCGCG GGCCGTCTCG ACGAAGGCCG AGCCCGCGAA GCCAGTGCCC
ACGGCGGCCC TTTCCCCCAC GAGCGCTTCG ACATCGACCG CCGGCAAGCC GGCGGCGCAC
GCCGCAGCGG GCACGCGCGT ATTCAGCGAA GCCGCGGCGT ACATCGTCAC CGACATCCTC
GCCGACAACA ACGCGCGCGT GCGCACGTTC GGCTTCGACA GCCCGCTCGC GACGCGCTTC
TTCTCCGCCG TCAAGACGGG CACGAGCAAG GACATGCGCG ACAACTGGGC GCTCGGCTAC
ACGTCGCGCT ACACGGTGGG CGTGTGGGTG GGCAACGCGG ACGGCTCGCC GATGTGGGAC
GTATCGGGCG TCACGGGCGC GGCGCCCGTG TGGGCCGCGA TCGTCGGCTA TCTGCACCGC
GATCTCGCGA GCCGCGCGCC GCGCCCGCCC GCCGGCGTCG AGCAGCGCCG CGTCGCGTTC
GAACGCGACG TCGAGCCCGC GCGCCCCGAG TGGTTCATCG CCGGCACCGC GCTCGACACG
GTGCGCCTCG CCGCGCCCGC GACCGCCGCC GCGGGCGGCG CAGACCGGCC GCGCGCGCCG
CTTTCGATCG GCGCGCCGAC CGACGGCACG ATCTTCGCGA TCGACCCGGA CATCCCGCCG
AAGCACCAGC GAATCTGGTT CGAGCGCGCG GCGGGGCGCG CGGCGCGCTT CTCGTGGCGG
CTCGACGGCA AGGTGATCGG CCGCGGCGAG CGCCTCGCGT GGATGCCGTG GCCGGGATCG
CACCGGCTCG AGCTCGTCGA CGCGCGCGGC AACGTCGCCG ACGCGGTCGG CTTCGAGGTG
CGCGGCGCGT TCGCGAAGAC GGCGGCCCCA CCGAAGCCGT GA
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| Protein sequence | MASTLARRAA QAAVPRWVWP FARPAGWSLG PVFGPVFGSV FGPAFGPAFG PAFGPAFGSA
FGPAFGSAFG SAFGSAFAAF GLALAPLLAA PPVRPRARRN PRPCGSPRRA ALPRARTAAS
RTLAVAMLAA PLAAHALPAY DDVRRDWRST DWLLLARDGT PLQRTRVELT ERRGDWIALA
DVSPAFREAI VVSEDKRFYA HSGVDWRGIA GAAWGNLWNE RTRGASTVTM QLAGLLSDTP
RRSGQRSLPQ KAAQAMNALR LERGWRKDQI LEAYLNLVPF RGETVGLDAM SHALFGKAPS
GLDVRESAVA AALVRAPNAS AAKVAERACR ILRDLRAAQP CESLDGYVRF VTSAPPGAAR
DGGEALAPHF ARRVAAEVKP GAGARVRSTL DAPLQRFARD TLTRALAELN APAHRRHVQD
GAVVVIDNAT GEIRAWVGSS GALSAARDVD AVLAPRQAGS TLKPFLYAQA LDERRLTAAS
LLDDAPIDLA AGGGLYIPQN YDKHFKGWVS VRTALGGSLN VPAVRTLVLV TPHRFARTLT
ALGLPLAEEG DYYGFSLALG SADVTLLSLA NAYRALANGG VARATLDVPG GSGSRNGNGN
GNDAVTSAPF APAVSKSKVG ASAVFPRAVS TKAEPAKPVP TAALSPTSAS TSTAGKPAAH
AAAGTRVFSE AAAYIVTDIL ADNNARVRTF GFDSPLATRF FSAVKTGTSK DMRDNWALGY
TSRYTVGVWV GNADGSPMWD VSGVTGAAPV WAAIVGYLHR DLASRAPRPP AGVEQRRVAF
ERDVEPARPE WFIAGTALDT VRLAAPATAA AGGADRPRAP LSIGAPTDGT IFAIDPDIPP
KHQRIWFERA AGRAARFSWR LDGKVIGRGE RLAWMPWPGS HRLELVDARG NVADAVGFEV
RGAFAKTAAP PKP
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