| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1106 |
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| Symbol | |
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| ID | 4905431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1059838 |
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| End bp | 1061904 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640144212 |
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| Product | diguanylate cyclase/cyclic diguanylate phosphodiesterase |
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| Protein accession | YP_001075141 |
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| Protein GI | 126456988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.804569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGCA CCTACAACCT TTGGCTGGTC GCGCTCTCGC TTGCGGTCGC CACGCTCGCC
TCCTATACCG CGCTCGACCT GTCGGGCCGG ATCGCGCTGC TCGCGCACGG CCGGCTGCGC
CATGCGTGGC TCGCCGGCAG CGCGGTCGCG ATGGGTATCG GCATCGGGTC GATGCACGTC
ATCGGCGTGC TGTCGGTGAC GCTGCCCATC CGCATCGGCT TCGACGCCGC GATCACCGGC
CTGTCGCTCG CGCTCGCGAT CGTGGTGTCC GGCTTCGCGC TGTATACGAT CGCCGGCGCC
CAACTGACGA GGCTGCGGCT CGGCATCGGC GGCGTTCTGA TGGGGCTCGG CATCGCGGGC
ATGCATTACA CCGGCGACGC CGCGATGCGG ATGAAGCCCG CCATCGAGTA CGACCCGCTG
CTGTTCACGG CATCGATCGT CATCGCGCTC GTCGCCTCGA CGGTCGCGCT ATGGATCGCG
CAGACGCTCA TCGGCATCGG CCGATCGCGG CTGGCCCGCA TCGGCGCGGC CGGCGTGATG
GGCGCGGCGA TCACCGGCAT GCACTACACC GCCTACGCCG CCGCGATCTT CGCCCCCGGC
TCGACCTGCG GCGCGGCGAC CGGCATCGAT CTGCGCTGGC TCGCGGCGAC CGTCGCGCTC
TTCACGGTCG CGATCCTGAT CGTCGCGCTG ATCCTGTCGC ACTTCGACGT GCGCACGACG
CTGCTCGCCG GATCGGTTTC GCGCCTGAGC GGCCAGATCG TGCGCATGGC CGCATTCGAC
ACGCTCACGG ATCTGCCGAA CCGCCGCACG CTGAACGAGC ACCTCGGCCG CGCGCTCGCG
GCGGCGCGGG CGCGCGGCGG CAAGCTGGCG ATCCTGTTCA TGGATCTCGA CGGATTCAAG
ACCATCAACG ATTCGCTCGG CCACCCGGCC GGCGACGAAG TGCTGAAAAC CTTCTCGCAG
CGGCTGCTGC GCTGCGTGCG AGACGGCGAC ATCGTCGCGC GCCTCGGCGG CGACGAATTC
GTCGTGCTGC TGGAGAGCGT TTCGTCGGAC GATGAAGCGG CCCGCGTCGC GCGCGATGTC
CTCGAACGGA TGCGCAAGGG GCGCTGGAAC GACGGGCAGG CGCTACAGGT CACGCCGAGC
ATCGGCATCG CGCTGTATCC GAAGGACGGC GATACGGCCG ACACGCTGCT CAGGCACGCC
GATGCGGCGA TGTATGCGGC CAAGCGCGGC GGCCGCTGCA CCTACCGCTT CTTCGAGGCG
ACGATGGACG AGGCGGCGGC GCGGGCGCTC AAGCTTCAGC ACGCGCTGCA CGAAGCGCTC
GATTCCGACT ACTTCTCGCT GTGCTTCCAG CCGAAATTCC GCTGCGACGG CCACCGGCTC
GCGGGCGCGG AAGCGCTGTT GCGCCTGAAT CATCCGACGC TCGGCAAACT CGCGCCGATG
GAATTCATCC CCGTGGCCGA ACGCTCCGGC CAGATCATCG AGATCGGCTA CTGGGTGATC
CGCGAAACGT GCCGGCACCT CAGACGCTGG CGGTCCGCGC ACAGGGCGGC CTGCCGCATC
GCGATCAATC TGTCGCCTCG GCAGCTCGCG CAGCCGGATC TCGTCGCGAA CATCCTCGAG
ATCGTGCGCG CCGAGCACGT CGAGCCGCGC CAGTTGATGT TCGAGATCAC CGAATCGGTC
GCGATGGAAG ACCCGCCGCG CACGATCGAG ATGATCCGGC TGTTCCAGGC GCACGGCTTC
GAGATCGCGA TCGACGACTT CGGCACCGGC TATTCGAGCC TCGCCTATCT GCAGCGATTC
GGCGCGAAGC AGCTCAAGAT CGACCGATTC TTCACCCACG CGCTCGACGA GCAAGGCCAC
GAAGGCGGCG CGATCGTCTC CGCGATCATC GCGCTCGCCC ACTCGCTCGC GATGGACGTG
GTCGCCGAAG GCGTCGAGAC GCGCTCGCAG CTCGACCGGC TCAAGACGCT GATGTGCGAT
GAAATCCAAG GGTTCCTGCT CGGCCGCCCC GTGCCGCCGG AAGAGTTCGA GGCGATGGTG
CCGCTGCACT CCGAGGCGCC GGCATGA
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| Protein sequence | MHGTYNLWLV ALSLAVATLA SYTALDLSGR IALLAHGRLR HAWLAGSAVA MGIGIGSMHV
IGVLSVTLPI RIGFDAAITG LSLALAIVVS GFALYTIAGA QLTRLRLGIG GVLMGLGIAG
MHYTGDAAMR MKPAIEYDPL LFTASIVIAL VASTVALWIA QTLIGIGRSR LARIGAAGVM
GAAITGMHYT AYAAAIFAPG STCGAATGID LRWLAATVAL FTVAILIVAL ILSHFDVRTT
LLAGSVSRLS GQIVRMAAFD TLTDLPNRRT LNEHLGRALA AARARGGKLA ILFMDLDGFK
TINDSLGHPA GDEVLKTFSQ RLLRCVRDGD IVARLGGDEF VVLLESVSSD DEAARVARDV
LERMRKGRWN DGQALQVTPS IGIALYPKDG DTADTLLRHA DAAMYAAKRG GRCTYRFFEA
TMDEAAARAL KLQHALHEAL DSDYFSLCFQ PKFRCDGHRL AGAEALLRLN HPTLGKLAPM
EFIPVAERSG QIIEIGYWVI RETCRHLRRW RSAHRAACRI AINLSPRQLA QPDLVANILE
IVRAEHVEPR QLMFEITESV AMEDPPRTIE MIRLFQAHGF EIAIDDFGTG YSSLAYLQRF
GAKQLKIDRF FTHALDEQGH EGGAIVSAII ALAHSLAMDV VAEGVETRSQ LDRLKTLMCD
EIQGFLLGRP VPPEEFEAMV PLHSEAPA
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