Gene BURPS1106A_A1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1082 
Symbol 
ID4903390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1040393 
End bp1041136 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID640144188 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionYP_001075117 
Protein GI126455738 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.175949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAA GACTGGCTGG CAAGACGGCG CTCGTCACGG CCGCCGCGCA GGGCATCGGC 
CGCGCGTCGG CCGAGCGGCT CGCGCGCGAG GGTGCGCGCG TGATCGCGAC GGACATCCGC
ATCGACGCGC TGCGCGACGG CCCGTTCGAT GCGCGCGTGC TCGACGTGCG CGACGGCGCG
GCGATCGACG CGCTCGCCGA TGCGATCGGC CCCGTCGACG TGCTGTTCAA TTGCGCGGGC
TTCGTGCACG CGGGCTCGGT GCTCGACGCG ACCGAAGACG AATGGGACTT CGGCTTCGAT
CTGAACGTGA AGTCGATGTA CCGGACGATC CGCGCGTTCC TGCCCGCGAT GCTCGCGCGC
GAGCGCGGCT CGATCATCAA CATGGCGTCG GCCGCCTCGA GCGTGAAGGG CGTGCCGAAC
CGGTTCGTCT ACGGCGCGAC GAAGGCGGCC GTGATCGGCT TGACGAAAGC GGTCGCGGCC
GATTTCGTCA CGCACGGGAT TCGCTGCAAC GCGATTTGCC CCGGCACCGT CGAATCGCCG
TCGCTCGATG CGCGCATCGC CGAGCAGGCG TGCGCGCGCG GCGAGCCGAT CGACGCGGTG
CGCGCCGCGT TCGTCGCGCG CCAGCCGATG GCGCGCATCG GCAGGCCGCA GGAGATCGCG
GCGCTTGTCG CGTATCTCGC GTCCGACGAG GCGTCGTTCA CGACGGGGGC GATCCATCTG
ATCGACGGCG GCTGGTCGAA CTGA
 
Protein sequence
MEARLAGKTA LVTAAAQGIG RASAERLARE GARVIATDIR IDALRDGPFD ARVLDVRDGA 
AIDALADAIG PVDVLFNCAG FVHAGSVLDA TEDEWDFGFD LNVKSMYRTI RAFLPAMLAR
ERGSIINMAS AASSVKGVPN RFVYGATKAA VIGLTKAVAA DFVTHGIRCN AICPGTVESP
SLDARIAEQA CARGEPIDAV RAAFVARQPM ARIGRPQEIA ALVAYLASDE ASFTTGAIHL
IDGGWSN