| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1077 |
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| Symbol | |
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| ID | 4905968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1036443 |
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| End bp | 1037468 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640144183 |
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| Product | carbohydrate ABC transporter permease |
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| Protein accession | YP_001075112 |
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| Protein GI | 126458424 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.255506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTA GCCTGACGAG TCCCGCGCTG CCGCCGGGGC CGGCGCGCGT CGTCGCGCGC
AAGCCGTTCG AGATCGCGCG GCTGCGCGAT CTCGCGTTGC TGCCCGCGCT CGTGCTGCTG
ATCGCGATCG GCGCGTTCGT GAGCCCGAGC TTTCTGACGA AGGCGAACCT GATCAGCGTG
CTCGGCGCGT CGGCCGCGCT CGCGCTCGTC GTGCTCGCCG AATCGCTGAT CGTGCTGACG
GGCAAGTTCG ATCTGTCGCT CGAATCGACG GTCGGCATCG CGCCCGCGAT CGGCGCGATG
CTCGTGATGC CGGCATCGTC CGCCGGCTTC GGCTGGCAGT GGCCCGCCGC CGCGGGGCTG
GCCGCGATCG TCGCGATCGG CGCGCTGATC GGCTTCGTCA ACGGTTTTCT CGTCGTGCGG
ATGCGGCTGA ACGCGTTCAT CGTCACGCTC GCGATGCTGA TCGTGCTGCG TGGGATGCTC
GTCGGCGCGA CGAAGGGCGG CACGCTGTTC GACATGCCGC CGGCGTTCTT CGCGCTCGCG
ACGACGGGCG TGTTCGGCCT GCCGCTGTCG GTGTGGCTCG CGGCGGCCGT GTTCGGCTGC
GCGGCGTTCA TGCTGCGCTA TCACCGCCTC GGCCGCGCGC TGTATGCGAT CGGCGGCAAC
GATCAGGCCG CGCGCGCGGC GGGGATTCGC GTCGAACGGA TCACGTGGGG CGTGTTCGTG
CTCGGCAGCA CGCTCGCGTC GATCGGCGGC CTCGTCGTCA CGGGCTACGT CGGCGCGATC
AACGCGAATC AGGGCAACGG GATGATCTTC ACGGTGTTCG CGGCCGCGGT GATCGGCGGC
ATCTCGCTCG ACGGCGGCAA GGGAACGATG CTCGGCGCGC TGACGGGCGT GCTGCTGCTC
GGCGTCGTGC AGAACCTGCT CACGCTCGCG CAGGTGCCGT CGTTCTGGAT TCAGGCGATC
TACGGCGTGA TCATTCTCGG CGCGCTGATG GTCGCGCGCG TCGCGGGCGG CGAGGGGCCG
GCATGA
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| Protein sequence | MKSSLTSPAL PPGPARVVAR KPFEIARLRD LALLPALVLL IAIGAFVSPS FLTKANLISV
LGASAALALV VLAESLIVLT GKFDLSLEST VGIAPAIGAM LVMPASSAGF GWQWPAAAGL
AAIVAIGALI GFVNGFLVVR MRLNAFIVTL AMLIVLRGML VGATKGGTLF DMPPAFFALA
TTGVFGLPLS VWLAAAVFGC AAFMLRYHRL GRALYAIGGN DQAARAAGIR VERITWGVFV
LGSTLASIGG LVVTGYVGAI NANQGNGMIF TVFAAAVIGG ISLDGGKGTM LGALTGVLLL
GVVQNLLTLA QVPSFWIQAI YGVIILGALM VARVAGGEGP A
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