| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1016 |
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| Symbol | |
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| ID | 4904566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 983357 |
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| End bp | 984433 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640144122 |
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| Product | outer membrane porin |
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| Protein accession | YP_001075052 |
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| Protein GI | 126455804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.308629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGG CGGGTATCGG GATCGGCGCG GCGGTGCCGC CGGCGCTCGC GCAATCGAGC
GTGACGCTGT ACGGCATCGT CGATTCCGGC ATCACGTACA CGAACAACCA GAAGGGGCAT
TCTGCCTGGA AGGCGACGAG CGGCAATGAG CAGGCCGCCC GCTGGGGGCT TGTCGGGCGC
GAGGATCTCG GCGGCGGCAC GAGCGCGATA TTCCGGCTCG AGAACGGCTT CGACATCGAG
AACGGTACGG CGAGCCAGGG CGGTCGGCTG TTCGGACGTC GCACGTACAT CGGATTGGCG
AACGATCGCT GGGGCGCGTT CACGATGGGC CGTCAGTACA ACGCGGTGCA GGAAACGCTG
GCTCCGCTGC ATATCGCAAC CGTACTCGGA AGATACGCAC ATCATCCGTT TGATGCCGAC
GACCTGGACA GTACGTTTCG CACGAACAAT TCGGTCCAGT ACCAGACGCC CGATTGGGGC
GGCGTGCGCG CGATCGCGAC GTACGGCTTC TCGAACTCGA CGTCGTTCGC GCGGAACCGC
ACATGGAGCG TCGGGGCGAG CTATGCGCGC GGCCCGCTGC AACTCGCCGC CGCATACGTG
CGCGTCGACT ATCCGGCGAT CGATGCGACC GGCGCGATCG CGTCCGACAA TTACTACGGG
TTCGTCAAGG GCGTCGCGCG GCAGCAGATC TGGGGCGCGG GCGGCGCGTA CGCGTGGGGC
GACGCGACCT TCGGGCTGTT GTATACGAGC GCGCTGTTCA GTCTGCAGAC GGGCGGCGCC
GAGCGCTTCA ACAATTTCGA GGGCAGCGTG CGCTACCGCG TGACGCCCGC GGTGCAGGTC
GCGCTCGGCG AGACGTACAC GCAGGTGCTC GCGTCGCACG CGGCCGCGCA TGACGCGCAC
TATCTGCAGA CGAGCGCGGG GATCCAGTAT TTCCTGTCGA AGCGCACGGA CGTCTATTTG
AACGTGTCCT ATCAACGCGC ATCGTCGAAT GCCGTGGCGT GGATCAAGGG GCTTGACGGG
GCATCGAGCA CGCGCACGCA GATCGTCGCG GTGACGGGCA TCCGGCACAA GTTCTGA
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| Protein sequence | MAVAGIGIGA AVPPALAQSS VTLYGIVDSG ITYTNNQKGH SAWKATSGNE QAARWGLVGR
EDLGGGTSAI FRLENGFDIE NGTASQGGRL FGRRTYIGLA NDRWGAFTMG RQYNAVQETL
APLHIATVLG RYAHHPFDAD DLDSTFRTNN SVQYQTPDWG GVRAIATYGF SNSTSFARNR
TWSVGASYAR GPLQLAAAYV RVDYPAIDAT GAIASDNYYG FVKGVARQQI WGAGGAYAWG
DATFGLLYTS ALFSLQTGGA ERFNNFEGSV RYRVTPAVQV ALGETYTQVL ASHAAAHDAH
YLQTSAGIQY FLSKRTDVYL NVSYQRASSN AVAWIKGLDG ASSTRTQIVA VTGIRHKF
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