| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0957 |
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| Symbol | opcP |
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| ID | 4905492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 934075 |
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| End bp | 935277 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640144063 |
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| Product | porin |
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| Protein accession | YP_001074993 |
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| Protein GI | 126458025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GCACTGCGGT CGCGATGACG GCCGCCGGAC TGGCGGCTGT CGCCACCGCG
CACGCTCAGA GCAGCGTGAC GCTTTACGGC ATCGTCGATA ACGGCATCGC GTATCAAAGC
AGCAGCACGT CGCTCGGCTC GACGACGGGC GGCCGCTCGG CGGTGAAGAT GTCGACGGGC
GTGTGGGCGG GCAGCCGCTT CGGCCTGAAG GGCAGCGAGG ATCTCGGTGG CGGCTCGAAG
GCCATCTTCC AGCTCGAATC GGGCTTCAGC ACGGCCAACG GCACGTCGCA GTTCGCGGGC
GGCATCTTCA CGCGCCAGGC GTGGGTCGGC CTGACCAACC CGACGTACGG CACGCTGACG
GCGGGCCGCC AGTACACCGC GTACTACACG CTGCTGTCGC CGTATAGCCC GACGACCTGG
CTCACCGGCT ATTTCGGCGC GCATCCGGGT GACATCGATT CGCTCGATAC CAGCTACCGC
ACGAACAATT CGCTCGTCTA CCTGTCGCCG AAGTTCTACG GTTTCACGTT CGGCGGCTCG
TATGCGTTCG GCGGACAGCC GGGCAGCGTG AACGCCGGCT CCACGTGGAG CGCGGGCATC
CAGTACATGA ACGGTCCGCT CGGCATCGCG GCGGCGTTCC AGCGCGTGAA CAACTCGACG
TCGGGCGGCG GCGACTGGGG CGCGAATTCG ACGACGTCGA ACGGCGGCGC GCAGACGGCC
GTGTCGGCGA TCAACAACGG CTACAAGACC GCGCAGGCGC AGCAGCGCGT CGCGGTGACG
GCCGGCTATC AGTTCTCGTC CGCATGGGAC ATCTCGGTGT CGTACTCGAA CGTGCAGTAC
ATCCCGGGCG TGAACTCGGC GTTCCGCAAC ACGGCGATCT TCAACACGGC GGGCGCGGTG
CTGCACTTCA AGCCGTCGGC TCAGTGGGAC TTCGCGGGCG GCTACGCGTA CACGCGCGCG
ACCCAGTCGA ACGGCATCAC GAGCGCCGCG CAGTACCATC AGTTCACGCT GTCGCAGTAC
TACAGCCTGT CGAAGCGCAC GGGCCTGTAC GCGGTCGAAG CGTATCAGCG CGCGAACGGC
AAGACGCTCG CGGGCGGCAA GATCATCGAC GCGACCGCGT CGATCGGCGA CGGCTTCAAC
ACGTCGCCGT CGTCGTCGCG CAGCCAGGTG GGCGTCGGCG TCGGCCTGAT CCACCGTTTC
TGA
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| Protein sequence | MKKRTAVAMT AAGLAAVATA HAQSSVTLYG IVDNGIAYQS SSTSLGSTTG GRSAVKMSTG
VWAGSRFGLK GSEDLGGGSK AIFQLESGFS TANGTSQFAG GIFTRQAWVG LTNPTYGTLT
AGRQYTAYYT LLSPYSPTTW LTGYFGAHPG DIDSLDTSYR TNNSLVYLSP KFYGFTFGGS
YAFGGQPGSV NAGSTWSAGI QYMNGPLGIA AAFQRVNNST SGGGDWGANS TTSNGGAQTA
VSAINNGYKT AQAQQRVAVT AGYQFSSAWD ISVSYSNVQY IPGVNSAFRN TAIFNTAGAV
LHFKPSAQWD FAGGYAYTRA TQSNGITSAA QYHQFTLSQY YSLSKRTGLY AVEAYQRANG
KTLAGGKIID ATASIGDGFN TSPSSSRSQV GVGVGLIHRF
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