| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0945 |
|---|
| Symbol | hpaI |
|---|
| ID | 4905466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 919796 |
|---|
| End bp | 920602 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640144050 |
|---|
| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| Protein accession | YP_001074980 |
|---|
| Protein GI | 126456885 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC CTGAGAATAC GTTCAAGGCC GCGCTTGCGC GCGGGCACGC GCAGATCGGG
CTGTGGCTCG GACTCGCGAA TCCCTATGCG GCCGAGGTCG TCGCGGGCGC GGGCTTCGAC
TGGCTGCTGA TCGACGGCGA GCACGCGCCG AACACGGTGC CGACGATCCT CGCGCAACTG
CAGGCGATCG CCGCGTATCC GTCGCATCCC GTCGTGCGCG TGCCGTGGAA CGACGCGGTG
GCCGTCAAGC AGGTGCTCGA TCTCGGCGCG CAGACGCTGC TCGTGCCGAT GGTGCAGAGC
GCCGACGAGG CGCGCGCGGC GGTGGCGGCG ACGCGTTATC CGCCGCACGG CGTGCGCGGC
GTCGGCAGCG CGCTCGCGCG CGCGTCGCGC TGGAACCGCG TCGACGATTA CCTGCGGCGC
GCGAACGAGC GGATCGCGGT GCTCGTGCAG GTGGAGACGC GCGCGGGGCT CGACGCGATC
GACGCGATCG CGCGCGTCGA CGGGGTCGAC GGCGTGTTCA TCGGGCCGGC CGATCTCGCG
GCCGATCTCG GGCATCTGGG CGAGCCCGCG CATCCGGACG TGCAGGCGGC GATCGATCGC
GCGATCGCCG CGATCGCCGC GGCGGGCAAG GCGGCGGGCA TCCTGTCGGC CGACCCGGCG
GCCGCGCGGC GCTACCTCGA GGCGGGCGCG ACGTTCGTCG CGGTCGGCGT CGACACGACG
CTGCTCGCGC GCGGCGCCGA GCGGCTTGCC GCGCAGTTCA AGCCCGCGGC CGGCGGCGCG
GCGCGCGCGG GCGACAGCCC TTACTGA
|
|---|
| Protein sequence | MRIPENTFKA ALARGHAQIG LWLGLANPYA AEVVAGAGFD WLLIDGEHAP NTVPTILAQL
QAIAAYPSHP VVRVPWNDAV AVKQVLDLGA QTLLVPMVQS ADEARAAVAA TRYPPHGVRG
VGSALARASR WNRVDDYLRR ANERIAVLVQ VETRAGLDAI DAIARVDGVD GVFIGPADLA
ADLGHLGEPA HPDVQAAIDR AIAAIAAAGK AAGILSADPA AARRYLEAGA TFVAVGVDTT
LLARGAERLA AQFKPAAGGA ARAGDSPY
|
|---|
| |