| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0900 |
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| Symbol | |
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| ID | 4904764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 883495 |
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| End bp | 885432 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640144006 |
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| Product | collagenase |
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| Protein accession | YP_001074936 |
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| Protein GI | 126456492 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT CCCACAATGT CGTCAATCGC TTTATTGTCG CCGCTTCTAT TATCATTGGA
GTCGTTCTTT ACAGTTCCGC TTGGGCAAAT CCGCAGCCCA TGCATACGAA GCAGGCACGT
ATGCCGCGTA TCCCGCAGAA TCTCCCGCTT TCACCAGACC AAGCCAAATA CGACCTGCCG
CTCAGCAAGT ATGACCGCGC AACGCTGATG GAGCCGTTGC GGCGGAAGCA ATCAGCGAAA
CCCGACAGGC GCACCCGGCC TGGAGCAGAT TGCCGCGACA TGTCAATAAT GACGCAATAT
CACGGTACGG CGCTTGCTGA TTACATAGCA AACCTCCCCG ATTATGAGTG CCACTACGGA
CTATTCTCGA TTGACAGGGC GATGGCCGCG CAGATTTTCA ATTCTGAAAA CGTGTGGGCT
GTTGCCAGCC GTCTCACTCA AGAAATCAAT CGTTACGACG CAACAAATAT TACATTGGTA
AATTTGCTTA TTTATCTGAG AGCCGCTTAT TTCCAATATG ACGCAGCCCA GCTTGCTGAT
CCGATTCCCG GTCTCGTAGT CTGGCTGCGT CCGTATATTT TGCAGAGCCT CTCTGGCGAC
GCGCTTTACC TCGAGAATTC ACGCGCGCCG AGCACCGCCA ACGAGCTGAT GATCCTAATC
ACAAACATGA AGGACGAGGC GTACTACCTG CCAACGCTGA AGGACCGAAT CGCGTTCTAC
ACCGCGAGCG CGACCAACCC TCAGGCTGCG GCGCCGCTAC TGCAGCGAAG CGCGGCGGGT
GGCTTCACCG GCTTGCTCAC GGTGTTCTTC TACGCGCATC AGCGCAGCGG CGCTCAGCCG
ATGCTCGATA GCGATGCGAC TCTGCCGGAG ACGCTCAACC GCTTCGTCAC GGCGAACCGC
GCATACCTGT CGAACACCAG TGCCGCCTAT CAGCTCGCCG ATGCGGCGCG CGAAACGTAC
CGCTTTCTCC GCTATCCGTC GCAGAAGCCG CGGGTGAAGA AAATGATTCA GGATATGCTC
GCGTCGACTA CCATGACGGG CCCGGACAAC GACCTGTGGC TCGCGGCAGC GGAAGCAGCC
GATTACGGCG ATCCCGGCAA CTGCGCAGAT TACGGCACGT GCGACTATCA GAAGCGGCTC
ATCGAGGCAG TGCTCACGCA TCGGTACTCA TGCAATGCGA ACGTACGAAT TCTCGCGCAG
GACATGACGG TGCCGCAATT CCAGTCGGCA TGCCAATCGG TCGCCCAGGA GGAGGACTAT
TTCCACCGGA TGATGAAGAC AGGGCACGTA CCGGTCGCGA ACGATCACAA TGACACGATC
GAAATAGTCG TATTCGGCGA CTACGACAAT TATCGGAAGT ACGCTTCGGT GATCTACGGA
ATTAGCACCG ATAACGGCGG CATGTACGTT GAAGGCGATC CGTCGGCACC CGGCAATCAG
GCGCGCTTCA TCGCGCACGA GGCTTCGTGG CTACGGCCGG AGTTCAAGGT CTGGAACCTT
GAGCACGAGT TTACGCACTA TCTCGACGGC CGTTACGACA TGGCGGGCGA CTTCGCGGCG
AGCACGGCGA AGCCCACCGT GTGGTGGATC GAAGGTCTTG CCGAATATAT CTCCAGAAAG
AACGATGACC AGGAATCGAT CGACGCGGTG CGCACGAACG CATATCGGCT CTCGGACGTG
CTTCAGACGA CTTATTCGTC CGGCGACTAT GTCACGCGTG CGTATCGATG GGGTTATATG
GCGACGCGCT TCATGTTTGA ACGTCATCGC GCGGACGTCG ACGCGATCGT GTCACGTTTT
CGCGTGGGCG ATTACGACGG TTACGCGGAC TATGTCGCGT ACATGGGCAA CCGCTATGAC
AGCGAGTTTG TTGACTGGGC ACGCGGCGCG ACAACAACCG GTGAGCCGCC GTTGCCGCCA
ACGAAAGCGG GGCATTGA
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| Protein sequence | MKNSHNVVNR FIVAASIIIG VVLYSSAWAN PQPMHTKQAR MPRIPQNLPL SPDQAKYDLP
LSKYDRATLM EPLRRKQSAK PDRRTRPGAD CRDMSIMTQY HGTALADYIA NLPDYECHYG
LFSIDRAMAA QIFNSENVWA VASRLTQEIN RYDATNITLV NLLIYLRAAY FQYDAAQLAD
PIPGLVVWLR PYILQSLSGD ALYLENSRAP STANELMILI TNMKDEAYYL PTLKDRIAFY
TASATNPQAA APLLQRSAAG GFTGLLTVFF YAHQRSGAQP MLDSDATLPE TLNRFVTANR
AYLSNTSAAY QLADAARETY RFLRYPSQKP RVKKMIQDML ASTTMTGPDN DLWLAAAEAA
DYGDPGNCAD YGTCDYQKRL IEAVLTHRYS CNANVRILAQ DMTVPQFQSA CQSVAQEEDY
FHRMMKTGHV PVANDHNDTI EIVVFGDYDN YRKYASVIYG ISTDNGGMYV EGDPSAPGNQ
ARFIAHEASW LRPEFKVWNL EHEFTHYLDG RYDMAGDFAA STAKPTVWWI EGLAEYISRK
NDDQESIDAV RTNAYRLSDV LQTTYSSGDY VTRAYRWGYM ATRFMFERHR ADVDAIVSRF
RVGDYDGYAD YVAYMGNRYD SEFVDWARGA TTTGEPPLPP TKAGH
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