Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0834 |
Symbol | |
ID | 4903510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 831009 |
End bp | 832391 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640143940 |
Product | NodT family efflux transporter outer membrane lipoprotein |
Protein accession | YP_001074870 |
Protein GI | 126458566 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAC GCCCGATTCA TCGTCTCGCG CGGCGCGCCG CCGCGCTCGC CGGCACGCTC GCGCTGCTGT CCGGCTGCAC GAGCGCCTCG CGCAACGCGC CGCCGCCCGC GCCCGAGCTG CCCGCGCAAT GGGCCGGGCC CGTTGCGCGA CAGGCGAGCG CCACGCCCGA CGGCTGGTGG CGCCGTTTCG GCGATCCGAC GCTCGATCGC CTGATCGACG ACGCGCTGCG CACGAACAAC GATCTCGCGG CCGCGGCGAT CCGCGTCTAT CGCGCGCAAT TGCAGGCGGG GCTCGCGGAT ACGAACCTGA CGCCGAACGT GACGCTCGGC GCGACGGGCA ACGCCTCGCG CACGCTCGAC ACGCACCAGA CGCGCCGCAC GAGCGGCGTG ACGGCGACGC TCGGCTACGA GCTCGACCTG TGGGGCAAGC TCGCCGCGCA GCGCGACGCC GCGCGCTGGG AGCTCGAAGC GACGCAAGCC GACCGCGATG CGGCGAGGCT CGCGCTGATC GGCACGACGG CCGCGCTGTA CTGGCAACTC GCCTATCTGA ACCAGCAGAT CGCGTTCGGC GACGCGAACA TCGCGTATGC CGAACGCACG CTGAAGCTCG TGCAGTCGCG CCACGCGGCG GGGGCGACGT CCGGGCTCGA CCTCGCGCAG GCCGAGCGCA ACCTGGCCGC GCTGCGCGCC GACCAGACGC AGTTGATCCA GCAGCGCACC GAGAATCGCA ACGCGCTCGC GATCCTGTTC GGCCGCCCGC CGCAGCGGCA GGCGGCCGAG CGCGACGCGC TGCCCGATAC GCCGCTGCCG GAGGTCGCCG CGGGCGTGCC GGCCGAGCTG CTCGGCCGCC GGCCCGATCT GCGCGCGGCC GAGTTCCGGC TGCGCGAATC GCTCGCGAAT GTCGACGTGA CGCGCACGAG CTTCTATCCG ACCTTCACGC TCACCGGCAG CGTCGGCACC GCGAGCACGA GCCTCGAGCG CGTGCTGCAG AATCCCGTCG CGACGCTCGG CCTCGGGCTC GCGCTGCCGT TCATCCAGTG GAACACGATG CAGTTGCAGA TCAAGGTGTC GCAATCGCAG TACGAGGAGG CCGTCGTCAA TTTCCGGCAA AGCCTGTACC GCGCGCTCGG CGAGGTCGAG AACGCGCTGG CCGCGCGCGT GCAGCTCGAC GCCGAGGCCG ACGAACGCGG CCGCGCGCTC GCGCTGGCGC GGCGCGCCGA AACGCTCGCG AAGGCACGCT TCGCGGCCGG CGCGACGGGC GTGCAGCCGT GGCTGGACGA GCAGCAGCGG CTGCGCGATG CCCAAAGCGC GCTCGCGCGC AATCAATTGG GACGACTCAA CAACCGGATG AACCTGTACC AGGTGCTGGG CGGCGCGGGA TAG
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Protein sequence | MTTRPIHRLA RRAAALAGTL ALLSGCTSAS RNAPPPAPEL PAQWAGPVAR QASATPDGWW RRFGDPTLDR LIDDALRTNN DLAAAAIRVY RAQLQAGLAD TNLTPNVTLG ATGNASRTLD THQTRRTSGV TATLGYELDL WGKLAAQRDA ARWELEATQA DRDAARLALI GTTAALYWQL AYLNQQIAFG DANIAYAERT LKLVQSRHAA GATSGLDLAQ AERNLAALRA DQTQLIQQRT ENRNALAILF GRPPQRQAAE RDALPDTPLP EVAAGVPAEL LGRRPDLRAA EFRLRESLAN VDVTRTSFYP TFTLTGSVGT ASTSLERVLQ NPVATLGLGL ALPFIQWNTM QLQIKVSQSQ YEEAVVNFRQ SLYRALGEVE NALAARVQLD AEADERGRAL ALARRAETLA KARFAAGATG VQPWLDEQQR LRDAQSALAR NQLGRLNNRM NLYQVLGGAG
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