| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0828 |
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| Symbol | mmsA |
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| ID | 4906169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 826080 |
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| End bp | 827609 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640143934 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001074864 |
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| Protein GI | 126455515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.520502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA CTCCGTCGTC CCGGAAGGGA CATCACGTGC CGACCGTGAA ACTGTTGATC
GCCGGCGAAT TCGTCGAATC CCATGCGACC GAGTGGCGCG ACATCGTCAA CCCGGCGACT
CAGGAACTGC TCGCGCGCGT GCCGTTCTCG ACCGTGGCCG AAGTCGGCGC GGCCGTCGAG
GCCGCGCATG CCGCGTTCGC GAAATGGAAG AGCACGCCGA TCTCCGCGCG CATGCGCATC
ATGCTGAAGT TCCAGGATCT CGTGCGCGCG AACCTGCCGC AGATCGCGAA GACGCTGACG
GCCGAGCAGG GCAAGACGCT GCCCGACGCC GAAGGCGACG TGTTCCGCGG CCTCGAGGTG
GTCGAGCACG CGTGCTCGGT CGGCACGCTG CAACTGGGCG AGTTCGCGGA GAACGTCGCG
GGCGGCGTCG ATACGTACAC GCTGCGCCAG CCGCTCGGCG TGTGCGTCGG CATCACGCCG
TTCAACTTCC CCGCGATGAT CCCGCTATGG ATGTTCCCGA TGGCGATCGT CTGCGGCAAC
ACGTTCGTGC TGAAGCCGTC CGAGCAGGAT CCGCTGTCGA CGATGCAGCT CGTCGAGCTC
GCGATCGAGG CGGGCGTGCC GAAGGGCGTG CTCAACGTCG TGCACGGCGG CAAGGAAGTC
GTCGACGCGC TGTGCTCGCA TCCGCTCGTG AAGGCGATTT CGTTCGTCGG CTCGACGGCC
GTCGGCACGC ACGTGTACCG GCTCGGCAGC GAGCACGGCA AGCGCGTGCA ATCGATGATG
GGCGCGAAGA ACCATGCGGT GATCCTGCCC GATGCGAACC GCGAGCAGAC GGTGAACGCG
CTCGTCGGCG CGGCGTTCGG CGCGGCGGGC CAGCGCTGCA TGGCGACTTC GGTCGCGGTG
CTCGTCGGCG CGGCGCGCGA CTGGCTGCCC GACATCGTCG CGAAAGCGAA GACGCTGAAG
GTCAACGCGG GCGCGGAAGC GGGCACCGAC GTCGGCCCCC TGGTGTCGCG CGCGGCGAAG
CAGCGGGTGC TCGGCCTCAT CGAGACCGGC GAACAGGAAG GCGCGAGGCT CGTGCTCGAC
GGCCGCGGCG TGAGCGTGCC CGGCTATGAG CACGGCAATT TCGTCGGCCC GACGATCTTC
GCGGACGTGA GGCCGGAGAT GTCGGTCTAC ACGCATGAAA TCTTCGGCCC GGTGCTGTGC
GTGATGTCGG TCGACACGCT CGACGAGGCG ATCGCGCTCG TCAACGCGAA TCCGTTCGGC
AACGGCGTCG GCCTGTTCAC GCAGAGCGGC GCGGCCGCGC GCAAGTTCCA GAGCGAGATC
GACATCGGCC AGGTCGGCAT CAACATTCCG ATTCCGGTGC CGGTGCCGTT CTTCAGCTTC
ACGGGCTCGC GCGGCTCGAA GCTCGGCGAT CTCGGCCCGT ACGGCAAGCA GGTCGTGCAG
TTCTACACGC AGACGAAGAC CGTCACCGCG CGCTGGTTCG ACGACGATGC GACGGCGGGC
GCCGTCAACA CGACGATTCG CCTGCACTGA
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| Protein sequence | MNATPSSRKG HHVPTVKLLI AGEFVESHAT EWRDIVNPAT QELLARVPFS TVAEVGAAVE
AAHAAFAKWK STPISARMRI MLKFQDLVRA NLPQIAKTLT AEQGKTLPDA EGDVFRGLEV
VEHACSVGTL QLGEFAENVA GGVDTYTLRQ PLGVCVGITP FNFPAMIPLW MFPMAIVCGN
TFVLKPSEQD PLSTMQLVEL AIEAGVPKGV LNVVHGGKEV VDALCSHPLV KAISFVGSTA
VGTHVYRLGS EHGKRVQSMM GAKNHAVILP DANREQTVNA LVGAAFGAAG QRCMATSVAV
LVGAARDWLP DIVAKAKTLK VNAGAEAGTD VGPLVSRAAK QRVLGLIETG EQEGARLVLD
GRGVSVPGYE HGNFVGPTIF ADVRPEMSVY THEIFGPVLC VMSVDTLDEA IALVNANPFG
NGVGLFTQSG AAARKFQSEI DIGQVGINIP IPVPVPFFSF TGSRGSKLGD LGPYGKQVVQ
FYTQTKTVTA RWFDDDATAG AVNTTIRLH
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