| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0796 |
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| Symbol | |
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| ID | 4903395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 796473 |
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| End bp | 797744 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640143902 |
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| Product | RhtX/FptX family siderophore transporter |
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| Protein accession | YP_001074832 |
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| Protein GI | 126456990 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR02718] siderophore transporter, RhtX/FptX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.314363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGATT TGCTGGAACA CCGCCGCCTC GTGATCACGA TCACGCTGCT TTATCTATCG
CAGGGCATCC CGATCGGCAT CGCGATGGAC GCGATGCCGA CCTTGCTGCG CCATGACGGC
GCGCCGCTGC ATGCGCTCGC GTTCCTGCCG CTCGTCGGGC TGCCGTGGGT CGTCAAGTTC
CTGTGGGCGC CCGTCGTCGA CAACCGCTGG TCCGCGCGGA TCGGCCGCCG CCGCAGCTGG
ATGCTGCCGA TGCAATGCAT CGTCGTGCTG TGCCTCGCGA GCCTCGCGCA GATCGGGATG
ACGGTGGCGA CGGCCGGCTG GGCGGTGGGC CTGCTGGCCG TCGCGTCGCT CGCGAGCGCG
ACGCAGGACA TCGCGAACGA CGGCATGGCC GCCGAGCATT TCCGGGGCGG CGCGCTCGCG
AAGATCAATG CGATCCAGAT CGCGGGCGTG ATGATCGGCT TCTTCGGCGG CGGCGCGGGC
GCGCTCACGC TGATCGGCCT GTTCGGCCAG CGGGCCGCGT TTCTCGCGCT CGCCGCCGTG
CCGCTCGCGA GCCTCGCGTG CGTGCTGTGG CTGATGCCGC GCGAAGCCGG CCGGCCGGGC
GCGCCGCGCG CGCACGACGC GAGCCTCGCG CGCTTCGCGA AGCGGCCGTT GTCGCTGTCG
CTGCTCGCGC TCGCGTTGCT GTCGGCGATG ACGGCCGTGT CCGGCTTCGG GTTGTCGAAG
CTGTTTCTCA ACGATGCCGG CTGGACGCTC GAGGCGATCG GCCGGCTCGG CATGGCGGGC
GGCATCGTGA CCGTCGTGCT CGGTTGCGGC GGCGGCGCGT GGCTCGTCCG GCGGCTCGGC
CTGTGGCGCG CGTTTTCGGC GGGCGTGAGC TGCGCGGGCG CGGGCGCGCT GCTGTGGTTC
GCGCAGGCGA ACGGGTGGCT TGCGAGCGCG CCGCACTGGG TGTGGCTGTG CACGGTGCTC
GGCTCGCTGT CGACGGGCAT CACGTCGGTG TCGATCATGA CGGCCGGCAT GCGTTTCGCG
GGCGATGGCG ATCAGGCGGG CACCGACGTC ACCGCGGTGC AGAGCACGCG CGATCTCGGC
GAGCTGATCG CATCGTCGAT GATGCTAACG TTGACGTCGA AGGTCGGCTA TAGCGGCGGT
TTTCTCGCGG GCGCGGTGCT CGCCGCGCTG GCCGCGCTGA TCGCGGCTCG GCTGCGGCGG
CGGGAGGCTG GGCGACCGGC GCGGCTGCAC GTTCGTGCCG TATCCGACGC GCCGATGACG
GGCCCGGATT GA
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| Protein sequence | MRDLLEHRRL VITITLLYLS QGIPIGIAMD AMPTLLRHDG APLHALAFLP LVGLPWVVKF
LWAPVVDNRW SARIGRRRSW MLPMQCIVVL CLASLAQIGM TVATAGWAVG LLAVASLASA
TQDIANDGMA AEHFRGGALA KINAIQIAGV MIGFFGGGAG ALTLIGLFGQ RAAFLALAAV
PLASLACVLW LMPREAGRPG APRAHDASLA RFAKRPLSLS LLALALLSAM TAVSGFGLSK
LFLNDAGWTL EAIGRLGMAG GIVTVVLGCG GGAWLVRRLG LWRAFSAGVS CAGAGALLWF
AQANGWLASA PHWVWLCTVL GSLSTGITSV SIMTAGMRFA GDGDQAGTDV TAVQSTRDLG
ELIASSMMLT LTSKVGYSGG FLAGAVLAAL AALIAARLRR REAGRPARLH VRAVSDAPMT
GPD
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