| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0760 |
|---|
| Symbol | |
|---|
| ID | 4904089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 754131 |
|---|
| End bp | 755141 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640143866 |
|---|
| Product | quaternary amine ABC transporter periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001074796 |
|---|
| Protein GI | 126455704 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGCCG CGCGGTTGAG TCGAAATCGC CTGCGCAATC CGTCGAACAG GGAGGCAACC
ATGAAGTCCA CCACGACATT CGTATTCGGT GCGGCGCTCG CCGCGGCATG CGCGCTGCCG
TCGCAATCCT TCGCGCAGGA CTCGGCCGCC TGCCGCAACG TGCGCTTCGC GGACATCGGC
TGGACCGACA TCACGTCGAC GACGGCGCTC GCGTCGCTGC TGTTCGACGG TCTAGGCTAC
AAGCCGACGA CGACGATCGC GTCCGTGCCG ATTTCGTTCG CAGGACTCAA GAACAGGCAG
CTCGACGTAT CGCTCGGCTA CTGGTGGCCG GTGCAGCAGC ATCAGTTGCA GCCGTTCCTC
GATTCGAAAT CGATCTCGGT GGTCGAGCCG CCGAACCTGT CGGGCGCGAA GGCGACGCTC
GCGGTGCCGA GCTACGTGTA CCAGGCCGGG CTGAAATCGT TCGACGACAT CGCGAAGCAT
CGCGCCGAGC TCGACGGCAA GATCTACGGG ATCGAGCCCG GCAGCAGCGC GAACGCGACG
ATCCAGAAGA TGATCGATAC GAACCAGTAC GGGCTCGGCG GTTTCAAGCT CGTCGAATCG
AGCGAGGCGG GGATGCTCGT CACGGTCGAG CGCGCGATCC GCGACAAGAA GTGGGTCGTG
TTCCTCGGCT GGGAGCCGCA TCCGATGAAC ATCCAGATCG GCATGAACTA CCTGTCGGGC
GGCGACGCGG CGTTCGGCCC GAACTACGGC GAAGCGCGCG TGTACACGCT GACGTCGCCC
GATTACATGG CGCGCTGCCC GAACGCGGGC AAGCTCGTCG GCAATCTGCG CTTCACCACG
CAAATGGAAA ACCAGCTGAT GCAGGCGGTG ATGAACAAGG TGAAGCCCGC GGAAGCGGCG
AAGGCGTACA TCCGAAAGAA TCCGCAAGTG CTCGATGCGT GGCTTGCCGG CGTGAAGACC
TACGACGGCA AGGACGGGCT GGCTGCGGTG AAGGCTTATC TGGGGCTCTG A
|
|---|
| Protein sequence | MQAARLSRNR LRNPSNREAT MKSTTTFVFG AALAAACALP SQSFAQDSAA CRNVRFADIG
WTDITSTTAL ASLLFDGLGY KPTTTIASVP ISFAGLKNRQ LDVSLGYWWP VQQHQLQPFL
DSKSISVVEP PNLSGAKATL AVPSYVYQAG LKSFDDIAKH RAELDGKIYG IEPGSSANAT
IQKMIDTNQY GLGGFKLVES SEAGMLVTVE RAIRDKKWVV FLGWEPHPMN IQIGMNYLSG
GDAAFGPNYG EARVYTLTSP DYMARCPNAG KLVGNLRFTT QMENQLMQAV MNKVKPAEAA
KAYIRKNPQV LDAWLAGVKT YDGKDGLAAV KAYLGL
|
|---|
| |