Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0756 |
Symbol | |
ID | 4905601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 748254 |
End bp | 749405 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640143862 |
Product | outer membrane porin |
Protein accession | YP_001074792 |
Protein GI | 126456892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0256487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGACAA TGAAGAAATC GAATGTTGCC GTGATGGGCG CGCTTGCGCT CGCCATCGGA ATCGCGCCGG GCGCAAGCCG CGCGCAGAGC AGCGTCACGC TTTACGGGAT TCTCGATGCC GGTATCACGT ACGTCAGCAA TACCGGCGGT TCGCACGTCT TCAAGTTCGA CGACGGCGTG TCGTACGGCA ACCGGATCGG CTTCAAGGGC ACCGAGGATC TCGGCGGGGG CCTGAAGGCG GTCTTCGTGC TCGAGAGCGG CTTTCGCCTG GGCAACGGCC AGCTCGGTTT CGGCGGCGCG CAGTTCGGCC GCCAGGCTTA CGTCGGATTG CAGAACAACT GGGGGACGCT GTCGTTCGGC AATCAGCTCG ACATGACCGA GGAGATGGTC TATCTGAACA ACATCTCCGC ATGGGCGAGC GGCTATGCGA TCCACCAGGG CGACTTCGAC CGCTTCAACG GCGATCGCCT GCCGAACTCG GTGAAGTTCC TGTCGAACGA CTTCAGCGGC TTGAAGTTCG GCGCGATGTA TTCGTTCGGC AACGTCGCGG GCGACTTCCA CCGCAACAGC GCGTGGAGCG CGGGCGCGAA CTACACGCAC GGCGATCTGT CGGTGGGCGC GGCCTATACG CACCTGAACA ATCCGTCCGG CATCTATGCG TTCGATCCGT ACGCGATGAT CGGCACGCGG ACCTTCCTCG GCCAGCCGAC GGTCAGCGTC GATCCGGCGA CGGGCAAGGT CACCGATCTG TTCGCGAATA CGCCGATGAA CGTCGACAGC CAGGGCACCT TCGGCGTCGG CGCGAGCTAC ACGATCGACA AGCTGACGCT GTCGGGCAAT TTCACGTACT CGACGATCAA GGGCTTCGGC AACACGTCGC ACATGCAGGT CTACGAAGGC GGCGGGCTGT ATCAGTTCAC GCCGGCGCTG AGCTTCGTCG CGGGCTACCA GCACACGCGC TTCGAAGGCC ATCACTGGAA TCAGGGGTCG GCGGGCGTTC ACTACCTGCT GTCGAAGCGC ACGGACGTCT ATCTTTCCGG CGACTACCTG CGTGCGTCGA ACGGTGTCGA CGCGGTGATC GGCTACAGCT TCACGCCGTC CACCACGCAA ACGCAGGCGG ACATTCGCAT CGGGATGCGC CACTCGTTCT GA
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Protein sequence | MPTMKKSNVA VMGALALAIG IAPGASRAQS SVTLYGILDA GITYVSNTGG SHVFKFDDGV SYGNRIGFKG TEDLGGGLKA VFVLESGFRL GNGQLGFGGA QFGRQAYVGL QNNWGTLSFG NQLDMTEEMV YLNNISAWAS GYAIHQGDFD RFNGDRLPNS VKFLSNDFSG LKFGAMYSFG NVAGDFHRNS AWSAGANYTH GDLSVGAAYT HLNNPSGIYA FDPYAMIGTR TFLGQPTVSV DPATGKVTDL FANTPMNVDS QGTFGVGASY TIDKLTLSGN FTYSTIKGFG NTSHMQVYEG GGLYQFTPAL SFVAGYQHTR FEGHHWNQGS AGVHYLLSKR TDVYLSGDYL RASNGVDAVI GYSFTPSTTQ TQADIRIGMR HSF
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