| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0690 |
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| Symbol | ppd |
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| ID | 4905738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 673436 |
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| End bp | 674617 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640143796 |
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| Product | 3-phosphonopyruvate decarboxylase |
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| Protein accession | YP_001074726 |
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| Protein GI | 126457573 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAG CCGCGCAGTT CGTCGAAGCG GCGCGCGCGC GCGGCTTCGA CTGGTACGCG
GGCGTGCCCT GCTCGTATCT GACGCCGTTC ATCAATTACG TGCTGCAGGA CCCGGCGCTC
CATTACGTAT CGGCGGCCAA CGAAGGCGAC GCGGTCGCGC TCGTCGCGGG CGCGACGCTC
GGCGGCCGGC GCGGGATCGC GATGATGCAG AACTCGGGGC TCGGCAACGC GGTGAGCCCG
CTCACGTCGC TCACGTGGAC GTTCAGGCTG CCGCAGCTCC TGATCGTCAC GTGGCGCGGC
CAGCCGGGCG TGCCCGACGA GCCGCAGCAC GCGCTGATGG GCCCGATCAC GCCCGCGATG
CTCGACACGA TGGAAATTCC GTGGGAGACG TTCCCGACGC AGGCCGACGC GATCGGCCCG
GCGCTCGATC GCGCGATCGC GCACATGGAC GCGACGGGCC GCCCGTACGC GCTCGTGATG
CAGAAAGGCA GCGTCGCGCC GCACGCGCTC GAGCATGCCT CGATGCCCGA GCGCCGCGCG
CACGCCGCCG CGCGCGCGAC GCCCGGCGCG GCCGCGCCTT CGGCATGGCC GACGCGCCAT
GACGCGCTCG CGCGGATCGT CGCGCGCACG CCGGCCGACT CGACGGTCGT GCTCGCGTCG
ACGGGCTTCT GCGGCCGCGA GCTGTACGCG CTCGACGATC GCCCGAACCA GCTCTACATG
GTCGGCTCGA TGGGCTGCGT GACGCCGCTC GCGCTCGGCC TCGCGCTCGC GCGGCCGGAC
CTGACCGTCG TCGCGCTCGA CGGCGACGGC GCCGCGCTGA TGCGCATGGG CGCGTTCGCG
ACGCTCGGCG CGTACGGCCC GCCGAACCTC GTGCATCTGC TGCTCGACAA CGGCGCGCAT
GAATCGACGG GCGGGCAAGC CACGGTGTCG CAATACGTGT CGTTCGCGGG CATCGCGGCC
GCATGCGGCT ACGCGACGGC GATCGAGGGC GACGATCTCG GCGTGCTCGA TGCGGCGCTC
GACGCGGCGC GCGCGGGCGA GCAGGCCGTC GAGCACGGCG GCGCGCACTT CGCGCGCCTG
TCGATCCGCA CGGGCGTGCC CGACGGCCTG CCCCGCCCGA CGGTGACGCC CGTCGACGTG
AAAACGCGCC TGATGCGCCA CATCGGCGCG ATGCCGGCCT GA
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| Protein sequence | MIEAAQFVEA ARARGFDWYA GVPCSYLTPF INYVLQDPAL HYVSAANEGD AVALVAGATL
GGRRGIAMMQ NSGLGNAVSP LTSLTWTFRL PQLLIVTWRG QPGVPDEPQH ALMGPITPAM
LDTMEIPWET FPTQADAIGP ALDRAIAHMD ATGRPYALVM QKGSVAPHAL EHASMPERRA
HAAARATPGA AAPSAWPTRH DALARIVART PADSTVVLAS TGFCGRELYA LDDRPNQLYM
VGSMGCVTPL ALGLALARPD LTVVALDGDG AALMRMGAFA TLGAYGPPNL VHLLLDNGAH
ESTGGQATVS QYVSFAGIAA ACGYATAIEG DDLGVLDAAL DAARAGEQAV EHGGAHFARL
SIRTGVPDGL PRPTVTPVDV KTRLMRHIGA MPA
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