Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0683 |
Symbol | |
ID | 4905406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 667558 |
End bp | 668769 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640143789 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001074719 |
Protein GI | 126457655 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.8441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGA CCGAAACAAA CACATTGTCC GACCGGGGCT GGCTAAGCCT GCTGATGCTC GTCGTCTGCT TGCCGCGCAT GACGATCGAC GCATATCTGC CGTCGCTGCC CGCGATGGCG GACGCGCTTC ACGGCACCGA CGCGCAGATG CAACTGACGC TCACGATGTA CATGGCCGGC TACGCACTGT CGATGCTGCT ATCCGGGCCG CTGTCCGACC GTTACGGGCG CAGGCCGGTG CTGCTCGCCG GCATGCTCGT GTATCTCGGC GCGAGCGTCG CATGCGCGAC GGCGACGAGC GTTCAGGGCA TCGTCGTCGC GCGGATCGGC CAGGCGCTGG GCGGCTGCTG CGGCACCGTG ATCGGCCGCG TGATCGTCCG CGAACGCTTC GGTACGGCGA TGCAAGCGGC GATGCTCAGC CGGATATCGG CGGGCATGGC GTTGTCGCCC GTCGTCGCGC CGCTTGCCGG CCACGTCGTC GCGCAGTGGC TCGGCTGGCG CGGCGTTTTC GCGTCGCTCG CGTTCGGCGG CGCCGCCGCC GCGCCGATGG TGCATCGCTT TCTGCCGGAG ACCCGCGTGC GCGCGGCGGC GAGCGAACGC GGCGCGGGCC TGGTGAAGAC TTACCTGTCG CTGCTTCGCG ACCGCCGGTT CGTGCGTTAC TCGCTCGCGA TCGGCTTCGT CTATTGCACG TATTTTCCGT TCATCGCCGA ATCGTCTGCG CTGTTTCAAC GCACGCTTCG CGCCTCCGGC GCTGTCTATG CGGCGATATT CGGGATCACG GTGCTCGGCT ACCTGATCGG CTCGAGCGTG TTTCGCCGGG CGAGCGGCCG GTTCGGAATC GATGCGATCA TCGCGTCGGC CGCCTTCGTC AATCTAGTCG GCGCGGCCGC GCTGTGGATC GGGACGTCGG TCGCGCCGCC GAGCGTCTGG TCGATCGCGT TGCCGATGTT CGTCGTCATG GTGTCGGTCG GCGTTTCGAT CCCGGCGTGC CAGTTCGCGG TGCTGCAGCC GTTCGCGAAG CTCGCGGGCA CCGCTTCCGG ATTGTTCTTC TTCATTCAGA TGGCGATGAC GGCCGGGTGC GGCGGGATGC TGAGCCGGCT GTCCGACGGC TCCGCGCGGC CGATGGCCGT CGTCACCGCC GCATCGAGCG CGGCGTTCAT GGCCGTCGTC ATGCTCGTGC GAACGCGCGG CGTGAACGGC CGGCGCGGTT GA
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Protein sequence | MNTTETNTLS DRGWLSLLML VVCLPRMTID AYLPSLPAMA DALHGTDAQM QLTLTMYMAG YALSMLLSGP LSDRYGRRPV LLAGMLVYLG ASVACATATS VQGIVVARIG QALGGCCGTV IGRVIVRERF GTAMQAAMLS RISAGMALSP VVAPLAGHVV AQWLGWRGVF ASLAFGGAAA APMVHRFLPE TRVRAAASER GAGLVKTYLS LLRDRRFVRY SLAIGFVYCT YFPFIAESSA LFQRTLRASG AVYAAIFGIT VLGYLIGSSV FRRASGRFGI DAIIASAAFV NLVGAAALWI GTSVAPPSVW SIALPMFVVM VSVGVSIPAC QFAVLQPFAK LAGTASGLFF FIQMAMTAGC GGMLSRLSDG SARPMAVVTA ASSAAFMAVV MLVRTRGVNG RRG
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