| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0642 |
|---|
| Symbol | |
|---|
| ID | 4904739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 624079 |
|---|
| End bp | 625569 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640143748 |
|---|
| Product | aldehyde dehydrogenase (NAD) family protein |
|---|
| Protein accession | YP_001074678 |
|---|
| Protein GI | 126457646 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CCACTTTGGC TGACTGGCAG GACAAGGCCG CGACGCTCGC GATCGAGGGG
CGCGCATTCA TCGACGGCGC GTATCGCGAC GCGCACGGCG GCAAGACCTT CGATTGCGTG
AGCCCGATCG ACGGGCGCGT GCTCGCGAAG GTCGCCGATT GCGGCGCGGC CGATGTCGAC
GCGGCGGTGG CCGCCGCGCG GCGCGCGTTC GACGCGCAGG CGTGGGCGGG CCTGAACCCG
CGCGAGCGCA AGGCGATCCT GCTGCGCTGG GCCGCGCTGA TGCGCGCGCA TCTCGACGAG
CTGGCGCTGC TCGAGACGCT CGACGCGGGC AAGCCGATCG GCGACACGAC GAGCGTCGAC
GTGCCGGGCG CCGCGTACTG CGTCGAATGG TTCGCCGAGG CGATCGACAA GGTGGGCGGC
GAAGTGGTGC CCGCCGATCA TCATCTCGTC GGCCTCGTCA CGCGCGAGCC GCTCGGCGTC
GTCGCCGCCG TCGTGCCGTG GAATTTTCCG ATCCTGATGG CGTCGTGGAA GTTCGGCCCG
GCGCTCGCCG CGGGCAACAG CGTCGTGCTC AAGCCGTCGG AGAAATCGCC GCTCACGGCG
ATCAGGGTCG CGCGGCTCGC GCACGAGGCG GGGATTCCGG CCGGCGTGTT CAACGTCGTG
CCGGGCGGCG GCGAGCCGGG CAAGCTGCTC GCGCTGCATC GCGACGTCGA CTGTCTCGCG
TTCACCGGCT CCACGGGTGT CGGCAAGCTG ATCATGCAGT ACGCGGGGCA ATCGAACCTG
AAGCGCGTGT GGCTCGAGCT GGGCGGCAAG TCGCCGAACA TCGTGCTGCC CGACTGCCCG
GATCTCGACC GCGCGGCGAA GGCGGCGGCG GGCGCGATCT TCTACAACAT GGGCGAGATG
TGCACGGCGG GATCGCGCCT GCTCGTGCAC CGCGAGATCA AGGACGCGTT CGTCGAAAAG
CTCGTCGCCG CGGCGCGCGC GTACAAGCCG GGCAATCCGC TCGATCCGAA CGTGTCGATG
GGCGCGATCG TCGACGCGAT CCAGCTCGAG CGCGTGCTCG GCTACATCGA GGCGGGCCGC
GCCGAAGCGC GGCTGCTGCT CGGCGGCGCG CGCGTGAACG AGGCGAGCGG CGGCTTCTAC
ATCGAGCCGA CCGTGTTCGA CACCGCGCCC GACACGCGGA TCGCGCGCGA GGAAATCTTC
GGTCCGGTGC TGTCGATGAT CACGTTCGAT TCGGTCGACG AAGCGGTGAG GATCGCGAAC
GACAGCGAAT ACGGGCTCGG CGCGGCCGTG TGGACCGCGA ACCTGACGAC CGCGCACGAA
CTCGCGCGGC GGTTGCGCGC GGGCACCGTG TGGGTCAACT GCTACGACGA AGGGGGCGAC
ATGAACTTCC CGTTCGGCGG CTACAAGCAA TCGGGCAACG GCCGCGACAA GTCGTTGCAC
GCACTGGAGA AGTACACCGA GCTGAAGTCC ACGCTCGTGC GGCTGCGCTA A
|
|---|
| Protein sequence | MDKTTLADWQ DKAATLAIEG RAFIDGAYRD AHGGKTFDCV SPIDGRVLAK VADCGAADVD
AAVAAARRAF DAQAWAGLNP RERKAILLRW AALMRAHLDE LALLETLDAG KPIGDTTSVD
VPGAAYCVEW FAEAIDKVGG EVVPADHHLV GLVTREPLGV VAAVVPWNFP ILMASWKFGP
ALAAGNSVVL KPSEKSPLTA IRVARLAHEA GIPAGVFNVV PGGGEPGKLL ALHRDVDCLA
FTGSTGVGKL IMQYAGQSNL KRVWLELGGK SPNIVLPDCP DLDRAAKAAA GAIFYNMGEM
CTAGSRLLVH REIKDAFVEK LVAAARAYKP GNPLDPNVSM GAIVDAIQLE RVLGYIEAGR
AEARLLLGGA RVNEASGGFY IEPTVFDTAP DTRIAREEIF GPVLSMITFD SVDEAVRIAN
DSEYGLGAAV WTANLTTAHE LARRLRAGTV WVNCYDEGGD MNFPFGGYKQ SGNGRDKSLH
ALEKYTELKS TLVRLR
|
|---|
| |