| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0634 |
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| Symbol | potF |
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| ID | 4905848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 617672 |
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| End bp | 618892 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640143740 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | YP_001074670 |
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| Protein GI | 126457538 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.820893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGGC GCAGCAACTG GGTCTTTCCT AACGGCATTG CCAATCGGGC AGGCGGCGCG
CGGGCGCCGC GCGCCCACCT TCATCATCAG GGGAACAACA TGAGTGTGAG CCATCTTCGT
CATGCGGTCG CGCGCGCAGC GCTCGTCGCG CTCGCCGGCG CGTCGGCGCT CGCCCTGCCG
GCCGCGCACG CGGCCGGCGC CGAGCTGAAC GTGTACAACT GGTCGGACTA CATCGCGAAG
GACACGATCC CGAACTTCGA GAAGCAATCC GGCATCCACG TCAAGTACGA CAACTACGAC
AGCGACGACA CGCTGCAGGC GAAGCTGCTC GCGGGCAGCT CCGGCTACGA CATCGTCGTG
CCGACGTCGA ACTACATGGC CAAGCAGATT CAGGCGGGCG TCTACCAGAA GCTCGACAAA
TCGAAGCTGC CGAACCTGTC GAACCTCGAT CCGACGCTGA TGAAGATGAT CGCCGACGCC
GATCCGGGCA ACCAGTACGG CGTGCCGTGG GCGTTCGGCA CCGACGGCCT CGGCTACAAC
GTGCAGGCGG TGAAGAAGGC GCTCGGCGAG AACGCGCCCG TCGACAGCTG GGCGCTCGTG
CTCGATCCGG CCAACGTATC CAAGCTCAAG GGCTGCGGCG TATCGTTCCT CGATCAGGCG
GTCGACGTGT TCGCCGCGAC GCTGCAATAC ATGGGCAGGA ATCCGAACAG CACGAACCCG
GCCGATTACC AGGCGGCGTT CGAGGTGCTG AAGAAAGTCC GCCCGTACAT CACTCAATTC
AACTCGTCCG GCTACATCAA CGATCTCGCG AACAACGACG TATGCGTCGC GCTCGGCTGG
TCGGGCGACG TCGGCATCGC GCATCGCCGC TCGGCCGAGG CGAAGCGCCC GTACGACATC
AAGTTCTCGA ATCCGAAGGA AGGCGGCCTG CTGTGGTTCG ACGTGATGGT GATCCCGAAG
GATGCGCCGC ACGCGGAAGC CGCGCTGAAG TGGATCAACT ACATCGAGGA CCCGAAGGTC
AACGCGGCGA TCACCAACGA AGTGTTCTAC CCGAGCGCGA ACCGCGCGGC GCGACAGTTC
GTCGTACCCG CCGTCGCGCA GGACCCGACC GTCTACCCGC CCGAGGACGT GCTCAAGAAG
ATGACGCTGA TGCGGCCGAT GCCCGCCGAC ATCCTGCGGC TCGAGAACCG TCTGTGGGCG
CAATTGAAGA CGGGACACTG A
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| Protein sequence | MRRRSNWVFP NGIANRAGGA RAPRAHLHHQ GNNMSVSHLR HAVARAALVA LAGASALALP
AAHAAGAELN VYNWSDYIAK DTIPNFEKQS GIHVKYDNYD SDDTLQAKLL AGSSGYDIVV
PTSNYMAKQI QAGVYQKLDK SKLPNLSNLD PTLMKMIADA DPGNQYGVPW AFGTDGLGYN
VQAVKKALGE NAPVDSWALV LDPANVSKLK GCGVSFLDQA VDVFAATLQY MGRNPNSTNP
ADYQAAFEVL KKVRPYITQF NSSGYINDLA NNDVCVALGW SGDVGIAHRR SAEAKRPYDI
KFSNPKEGGL LWFDVMVIPK DAPHAEAALK WINYIEDPKV NAAITNEVFY PSANRAARQF
VVPAVAQDPT VYPPEDVLKK MTLMRPMPAD ILRLENRLWA QLKTGH
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