| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0621 |
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| Symbol | |
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| ID | 4904875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 602714 |
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| End bp | 604378 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640143727 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001074657 |
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| Protein GI | 126456244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGC GCTTCGTTTC CCTCCGGATC GGCGCGGCGG CGGCCGTACT GGCGTTCGCC
GCGGGCTGCA CGACATTCTC GCGGGACGGC GGCTTCGGCG CCGTGTCGAG CGCGGCCGCC
GAGCGGCTCG GCCAGGACGC GGTGCTGGTG AAGACCGACG CCGATCGCGA TGCCGTGGCG
CGTCGCACGC AGGCGCTGCT GTCGAAGCCG CTCGGCATCG ACGACGCGGT TCAGATCGCG
CTGCTGAACA ACCGCGGCCT GCAGGCTTCG TATGCGGAGC TCGGCCTGTC CGAGGCCGAT
CTTGTGCAGG CGGGACGGCT GCCGAACCCC GGCTTCACGT TCAGCCGCAC GCATTCGAGC
AACGACCTGA GCATCGGCCG CACGTTCTCG ATGAGTGTCC TGAGCATGCT GACGCTGCCG
CTCGCGACGA AGATCGAGGG GCGGCGCTTC GAGCAGACCA AGCTCGAGAC CGCCGACGCG
ATGCTGAAGG TCGCGGCCGA CACGCGCCGC GCGTACGTCG AGGCGGTCGC CGCCGCGCAG
GCGGCGACCT ACGCGGAGCA GGTGAAGGAT TCGGCGGACG CCGGCGCGGA GCTCGCGCTC
CGGATGCGGC GCGCCGGCAA CTTCAGCCGG CTCGATTACG CGCGCGAGCA GGCGTTCTAC
GCGGACGCGG TCGCGCAGCT CGCGAACGCG CGGCTGCGCG CGGTCGCCGC ACGCGAGAAG
CTCACGCGCG CGATGGGGCT GTGGGGCGCG TCGGCCGGCT ATGAACTGCC CGAGCGCCTG
CCGGAGCTGC CGGCCGAACG GCCGCGGCTC GAGGACGTCG AGCGCTTCGC GATGGACCAC
CGCCTCGACA TCCGGGCCGC GAAGCTGAGG ACGCAGGGCG TCGCGAGCTC GCTCGGGCTC
ACGCAGGCGA CGCGCTTCGT CAACGCGCTC GAACTCGGCT ACCTCGACAA CTACGAGACC
GACAAGGGGC ACGAGCACGG CTACGAGATC AGCGTCGAGA TTCCGCTGTT CGACTGGGGC
GGCGCGAAAG TCGCGCGCGC GAAGGCGGCC TACCTGCAAT CGGCGAACCG GCTCGCGCAG
ACGGCGATCG ACGCGCGCTC CGAAGTGCGC GAATCGTACG CGGCGTACGT GACGCGCTAC
GACATCGCGA AGCACTATCG CGACGAGGTC GTGCCGCTGC GCAAGACGAT TTCCGACGAG
ATGCTGCTGC GCTACAACGG CATGCTCGTC AGCGTGTTCG AGCTGCTTGC CGACGCGCGC
GATCAGATCG GCGCGGTGAA CGCCTATATC GATGCGCTGA AGGACTACTG GCTCGCGCAG
GCCGATCTGC AGCAGGCGAT GGGCGGGCGT TTGCCGCGCG GCGCGCAGGC GGCCGGCGAG
CCGCCGGCGG CGACGCCGGC TTCCGCGGCC GCCGCCGGCG CGCGCGCCGC GGCGGTGGCC
TCGGGCGCGG CGGCGCCGGC GAGCGGGGCC ACGTCGGTGT CGTCGTCCGC GTCCGTGTCC
ACATCCGCGT CGGCGTCCAT GCCCGCAACC ACGCCCGCAT CCACGGCAGC GTCGGCCCCC
GCGCTCGCAT CGCCTCGCGC GATCGCGACG GCGGTCTCCT CCCACGCGCA CGAGCCGGCT
TCGTTATCCG GCGCCGTGCC ACTCACGAAT TCGAAAGGTC AATGA
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| Protein sequence | MTARFVSLRI GAAAAVLAFA AGCTTFSRDG GFGAVSSAAA ERLGQDAVLV KTDADRDAVA
RRTQALLSKP LGIDDAVQIA LLNNRGLQAS YAELGLSEAD LVQAGRLPNP GFTFSRTHSS
NDLSIGRTFS MSVLSMLTLP LATKIEGRRF EQTKLETADA MLKVAADTRR AYVEAVAAAQ
AATYAEQVKD SADAGAELAL RMRRAGNFSR LDYAREQAFY ADAVAQLANA RLRAVAAREK
LTRAMGLWGA SAGYELPERL PELPAERPRL EDVERFAMDH RLDIRAAKLR TQGVASSLGL
TQATRFVNAL ELGYLDNYET DKGHEHGYEI SVEIPLFDWG GAKVARAKAA YLQSANRLAQ
TAIDARSEVR ESYAAYVTRY DIAKHYRDEV VPLRKTISDE MLLRYNGMLV SVFELLADAR
DQIGAVNAYI DALKDYWLAQ ADLQQAMGGR LPRGAQAAGE PPAATPASAA AAGARAAAVA
SGAAAPASGA TSVSSSASVS TSASASMPAT TPASTAASAP ALASPRAIAT AVSSHAHEPA
SLSGAVPLTN SKGQ
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