Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0583 |
Symbol | |
ID | 4904113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 574367 |
End bp | 575266 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640143689 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001074619 |
Protein GI | 126457173 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.824085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATTCG ACGATCTCCG AATCTTCGTC GCGACCGTGG AAGCGGGCAG CTTCACGGGC GCGGCCGACA AGCTCCTGCT GTCCAAGCAG TTCGTCAGCC GGCGCGTGAT GGCGCTCGAG GCGTCGCTCG GCGTCAGGCT GCTCGTGCGC AACACGCGCA AGCTCGCGGT GACGGAGCTC GGCCACGAGC TCCACGCGCG CGCGACGCGC ATCCTCGCCG ACATCGCGGA AACCGAGGAG GCGATGTCCG CGCGCCGCGG CGACCTGCGC GGAACGCTGA AGATCAGCGC GCCGATGTCG TTCGGCATCG CGCATTTGTC GCCGCTGATC GCCGAATTCC TCGTCCGGCA TCCGGCCGTG CGGCTCCATG TCGAGCTCAG CGATCGTCAT GTCGATCTGA TCGGCGAAGG TTTCGACCTC GCGCTGCGCA TCGGCGCGCT GCCCGATTCG ACGCTGATCG CGCGGCGTCT CGGCGAGCTG CGGATGGTCG CATGCTGCAG CCCCGCCTAT CGCCGCAAGC ACGGCGCGCC CGCGACGCCC GCCGATCTGC ACGGCCGCGC GTGCCTGCTG TACGGGCAGG AAGGCCGCAC CGGCTGGGAG TTCATGATCG ACGGCGCGCG CCGCACGTTC GAAGTGCAAG GCGCGCTGCT CGCGAACAAC GGCGACGTGG TCCGCGACGC GGCCGTCGCG GGGCTCGGCA TCGCGCTGCT GCCGCATTTC ATCGTCGCCC ACGCGCTGGA CGCGGGCCGG CTCGTGGCCG TGCTCGAACC GTTCGCGCAG GCGCCGCTGC CGATCAACGC CGTCTATCCG CAGCACCGGC AGGACATGGC GGCGTGCCGG ACGTTTCTCG GCTTCATCGA AGAGCGGTTG CGCGAGCGCT TCGCCAAGCC GCGCCGATAG
|
Protein sequence | MQFDDLRIFV ATVEAGSFTG AADKLLLSKQ FVSRRVMALE ASLGVRLLVR NTRKLAVTEL GHELHARATR ILADIAETEE AMSARRGDLR GTLKISAPMS FGIAHLSPLI AEFLVRHPAV RLHVELSDRH VDLIGEGFDL ALRIGALPDS TLIARRLGEL RMVACCSPAY RRKHGAPATP ADLHGRACLL YGQEGRTGWE FMIDGARRTF EVQGALLANN GDVVRDAAVA GLGIALLPHF IVAHALDAGR LVAVLEPFAQ APLPINAVYP QHRQDMAACR TFLGFIEERL RERFAKPRR
|
| |