| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0532 |
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| Symbol | |
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| ID | 4904928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 516584 |
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| End bp | 518599 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640143638 |
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| Product | solute/sodium symporter (SSS) family protein |
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| Protein accession | YP_001074569 |
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| Protein GI | 126457709 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACGA ATCGGCTGGT TCGCGCGTAC GCGCTGTACA CGATCGGCTT CGCCGCGTTC
GTGCTGCTGC TGTGGCGGAT CGAGCGCGCG ACCGGGCCGG GCGTGTGGAT CGGCTATGTG
TTCCTGTTCG TGCCGATCGC GGTCTATGCG GTGATCGGGC TGCTGTCGCG GACATCGGAC
CTCGTCGAAT ACTACGTGGC CGGGCGGCGC GTGCCGTCCG CGTTCAATGG CATGGCGACC
GCCGCCGACT GGCTGTCCGC GGCGTCGTTC ATCGGCCTCG CGGGCTCGCT GTACGCGACC
GGTTACGACG CGCTCGCGTA CCTGATGGGC TGGACGGGCG GTTTCTGCCT CGTTGCGTTC
CTGCTCGCGC CATACGTGCG CAAGCTCGCG CGCTACACGA TTCCCGATTT TCTGGGCACG
CGCTTTTCGA GCACGCTCGT CAGGGCGCTC GCGGCGATCG CCGCGATCCT GTGCTCGTTC
GTCTACCTGG TCGCGCAGAT ACAGGGCATC GGCCTCATCG CGACGCGCTT CATCGGCGTC
GATTTCTCGA TCGGCATCTT CTGCGGCCTC GCGGGGATTC TCGTGTGCTC GTTTCTGGGC
GGGATGCGGG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CATTGCGTTC
CTGCTGCCGG TTTCGCTGAT CGCGATGAAG AACGGCCTCG GGCCCGTGCC GCAATTCAAT
TACGGCCGGC TGATGTCGCG GGTCGAAACG CTCGAGGGCG AGATGCGCGA CGCGCCGCAG
GAGCGGCAGG TGCGCGAAAC GTATCGTCGG CAGGCGGGCG CGATCCAGGC GCGGCTCGAC
CGGCTGCCGG CGTCTTACGA CGAGGCGCGC GCGAAGCTGG TCGATCAGGT CGCCGAGCTG
CGCCGGCACA ACGGGCCGCT GCGCGAGATC AACCAGCGCG AACGCGCACT TGCCGAGTTT
CCGCGCGATC CGGCGGCGGC GCGGGTGGTG TGGGAGCAGG CGCGCGACGA ACTGCTCGCG
CGCGCGGCGG CCCCGGTGCC GATGCACGAG CCGTTTCCGG CCGCGAGCGG CGACGATCGC
CGCCCGCGCG GGCGCAACTT CCTCGCGCTG CTGCTGTGCT TGTCGCTCGG CACGGCGAGC
CTGCCGCACA TCCTGACGCG CTACAACACG ACGACCTCGG TGGCGGCCGC GCGGCGCTCG
GTGGGCTGGA CGCTGTTTTT CATCGCGCTG TTCTATTTGA CGGTGCCGGT GCTCGCGGTG
CTGATCAAGT ACGAGATCCT GACGAATCTG GTGGGGCGGC CGTTCGCCGA TCTGCCCGCG
TGGATCACGC AATGGCACCG TTTCGAGCCG GGGCTCATCG GCGTTACCGA CCTGTTGCGC
GACGGCATTG TCCATTGGTC GGAGATCCAG ATGCAGCCCG ATATCGTCGT GCTCGCGGCG
CCGGAGATTG CGGGGCTGCC GTATGTGGTG TCGGGGCTGA TCGCGGCGGG CGCGCTTGCC
GCGGCGCTGT CGACGGCGGA CGGGCTGCTG CTGACGATCG CGAACGCGCT GTCGCACGAC
GTCTACTACC ACATGGTTGC GCCGGACGCG TCGAGCCAGC GGCGCGTGAC GATCTCGAAG
GTGCTGTTGC TCGGCGTCGC GCTGTTTGCG TCGTATGTTG CGTCGCTGAA TACGGGGAAG
ATTCTGTTTC TTGTCGGGGC GGCGTTCTCG CTCGCGGCGT CGAGTTTCTT TCCGGTGCTC
GTGCTGGGCG TGTTCTGGAA GCGCACGACG ACGCGCGGCG CGGTGGCGGG GATGATGACG
GGGCTTGGCG TGTGCGTGTA CTACATCGTG TCGACGTATC CGTTCTTCAC GCAGATCACG
GGCTTCGCGG GGCCGGGCTG GCTCGGCATC GAGCCGATCA GCTCGGGCGT GTTCGGCGTG
CCGGCCGGGT TTGCGACGGC GATCGTCGTG AGCCTGCTGG ATCGGCGGCC GGATGCGTAC
ACGAACGCGC TTGTCGACTA TATCCGGCAC CCGTGA
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| Protein sequence | MLTNRLVRAY ALYTIGFAAF VLLLWRIERA TGPGVWIGYV FLFVPIAVYA VIGLLSRTSD
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYLMG WTGGFCLVAF
LLAPYVRKLA RYTIPDFLGT RFSSTLVRAL AAIAAILCSF VYLVAQIQGI GLIATRFIGV
DFSIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILIIAF LLPVSLIAMK NGLGPVPQFN
YGRLMSRVET LEGEMRDAPQ ERQVRETYRR QAGAIQARLD RLPASYDEAR AKLVDQVAEL
RRHNGPLREI NQRERALAEF PRDPAAARVV WEQARDELLA RAAAPVPMHE PFPAASGDDR
RPRGRNFLAL LLCLSLGTAS LPHILTRYNT TTSVAAARRS VGWTLFFIAL FYLTVPVLAV
LIKYEILTNL VGRPFADLPA WITQWHRFEP GLIGVTDLLR DGIVHWSEIQ MQPDIVVLAA
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYHMVAPDA SSQRRVTISK
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAVAGMMT
GLGVCVYYIV STYPFFTQIT GFAGPGWLGI EPISSGVFGV PAGFATAIVV SLLDRRPDAY
TNALVDYIRH P
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