Gene BURPS1106A_A0488 details

Gene Information

• Locus tag: BURPS1106A_A0488
• Symbol: phnT
• ID: 4904259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 478352
• End bp: 479449
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640143594
• Product: 2-aminoethylphosphonate ABC transporter, ATP-binding protein
• Protein accession: YP_001074530
• Protein GI: 126455477
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.296007
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATACCG CAAGTCTCAC CCATCCCGGC GCGTTCGACG CGGCGCGCCC GCACGCGGCG 
CCGCGCGCGG GCGCGTGCGG CGGCGTGCGC ATCGAGCATC TGAGCGTGCG CTACGGCGCG 
CGCACGGTGC TCGACGATCT GTCGCTCGAG ATCGGCGCGG GCGAACTGCT CGCCGTGCTC 
GGCAAGAGCG GCTGCGGCAA GACGACGTTG CTGCGCTTCA TCGCCGGCTT CGTGAAGGCG 
GACGGCCTGA CGGGCACGCT CGCCGTCGCC GGCCGCGACC TCACGCACGC GCCGCCGCAC 
AAGCGCAACC TCGGATTGCT GTTCCAGAAC TACGCGCTGT TTCCGCACCT GACGGTGTTC 
GAGAACGTCG CGTTCGGGCT GCGCGCGCGG CGCATGTCGT CCGCGGACAT CGCGCGGCGC 
GTCGCCGACG CGCTCAAGCT CGTGCAGCTC GGCGACGCCG GCCATCACCT GCCCGCGCAA 
CTGTCGGGCG GCATGCAGCA GCGCATCGCG CTCGCGCGCG CGCTCGTGAT CGAGCCGGAC 
GTGCTGCTGC TCGACGAGCC GCTGTCCGCG CTCGACGCGA ACCTGCGCGC GTCGGTGCGC 
AGCGAGCTGA AGGCGCTGCA CGAGCGACTG CCGAATCTGA CCGTGGTCTG CGTGACGCAC 
GATCGCGACG ACGCGCTCGT GCTCGCCGAT CGCGCGCTGC TGATGCGCGA GGGGCGCGTC 
GCGCAGCTCG GCACGCCGCA GCAGTTGTAC GACGCGCCCG CCGACGGCTT CGTCGCGCGC 
TACCTGGGCG CGGCGAACCT GCTGCCGCCG AACGTCGTGT TCGCGTTCGG CGATCCGCGC 
CACGACGTGC GCGACAAGGT TGCCTGCGTG CGGCCGGAGC GCCTCGCCGT GCGGCCGCTG 
GGCGAAGGGC GGCTGCACGG CACGATCGCG TCGGTCGAAT GGCACGGCGC GGCGCTGTCG 
CTGACCGTGA TGCTCGACGC GGCGTGCGAC GAGCCGGTGC TCGTCACGAT GCAGCGCGGC 
CGGGGCCCGG CACCCGAGCG CGGCGCGCGC GTATCGCTCG ATTGCGAGGC GGACGATGTC 
GTCCTTATCT CACCTTGA 

 

Protein sequence

MDTASLTHPG AFDAARPHAA PRAGACGGVR IEHLSVRYGA RTVLDDLSLE IGAGELLAVL 
GKSGCGKTTL LRFIAGFVKA DGLTGTLAVA GRDLTHAPPH KRNLGLLFQN YALFPHLTVF 
ENVAFGLRAR RMSSADIARR VADALKLVQL GDAGHHLPAQ LSGGMQQRIA LARALVIEPD 
VLLLDEPLSA LDANLRASVR SELKALHERL PNLTVVCVTH DRDDALVLAD RALLMREGRV 
AQLGTPQQLY DAPADGFVAR YLGAANLLPP NVVFAFGDPR HDVRDKVACV RPERLAVRPL 
GEGRLHGTIA SVEWHGAALS LTVMLDAACD EPVLVTMQRG RGPAPERGAR VSLDCEADDV 
VLISP