Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0483 |
Symbol | aroE |
ID | 4906282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 473215 |
End bp | 474069 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640143589 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001074525 |
Protein GI | 126456237 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGGC GTTCGTTTCT GATCGGCCTG ATCGGCGCCG GGATCGGCGG CTCGCTGTCG CCCGCGATGC ACGAGGCGGA GGGGTGCGGG CAGGGTCTGA ACTACGTGTA CCGGCGCATC GATCTCGACG CGCTGGGGCT GACGGCCGAC GCGCTGCCTG AGCTGCTCGC GGCCGCCGAG CGGATGGGCT TCGACGGGCT GAACATCACG CATCCGTGCA AGCAGCGCGT GATCGAGCAT CTCGACGAAT TGTCGGCGGA CGCGGCCGCG CTCGGCGCGG TCAACACGGT GTGCTTCGCG CACGGCCGGC GCATCGGCCA CAACACCGAT TGGTCGGGCT TCGCGAAGGC GTTCGCGCGC GGGCTGCCGG GCGCGTCGCT CGAGCGCGTC GTGCAGCTTG GCGCGGGCGG CGCAGGCGCG GCCGTCGCGC ACGCGGCGCT CACGATGGGC GCCGCGCAAC TCGCGCTCTT CGATGTCGAC CCCGTGCGCG CGCGCTCGCT TGCCGACCAG TTGCAGGCGC GCTTTCCGCA CGCGCGGCTG AGCGCCGGCG GCACGCTCGC CGACGCGCTC GCGAACGCGA CCGGCCTCAT TCACGCGACG CCGACGGGCA TGCTCGGGCA TCCGGGCCTG CCGCTGCCGG CGCACCTGCT GCGAAGCGGG CTCTGGGTGG CCGACATCGT CTATTTTCCG CTCGAGACCG AGCTGATCCG CGCGGCGCGC GCGCTCGGCT GCCGCACGCT GCCGGGCGGC GGCATGGCGG TCTATCAGGC GGTCGACGCG TTCGAGCTCT TCACGGGCCG CGCGCCGGAT GCCGAGCGAA TGTTCGAGCA CTTCCGGGCG CTCGTCGCGC GCTGA
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Protein sequence | MSGRSFLIGL IGAGIGGSLS PAMHEAEGCG QGLNYVYRRI DLDALGLTAD ALPELLAAAE RMGFDGLNIT HPCKQRVIEH LDELSADAAA LGAVNTVCFA HGRRIGHNTD WSGFAKAFAR GLPGASLERV VQLGAGGAGA AVAHAALTMG AAQLALFDVD PVRARSLADQ LQARFPHARL SAGGTLADAL ANATGLIHAT PTGMLGHPGL PLPAHLLRSG LWVADIVYFP LETELIRAAR ALGCRTLPGG GMAVYQAVDA FELFTGRAPD AERMFEHFRA LVAR
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