| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0473 |
|---|
| Symbol | |
|---|
| ID | 4905393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 463906 |
|---|
| End bp | 464838 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640143580 |
|---|
| Product | hydroxyproline-2-epimerase |
|---|
| Protein accession | YP_001074516 |
|---|
| Protein GI | 126456094 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACA TCCACATCAT CGATTCGCAC ACGGGCGGCG AACCCACGCG CGTCGTCGTG
TCCGGCTTTC CGGCGCTCGG CGGCGGCACG ATGGCCGAGC GTCTGGCCGT GCTCGCGCGC
GAGCACGACC GCTACCGCGC CGCCTGCATC CTCGAGCCGC GCGGCAGCGA CGTGCTCGTC
GGCGCGCTGC TGTGCGAGCC CGTCTCGGCC GGCGCGGCGG CGGGCGTGAT CTTCTTCAAC
AACGCGGGCT ATCTCGGCAT GTGCGGGCAC GGCACGATCG GCCTCGTGCG CACGCTGCAC
CACATGGGGC GCATCGGGCC GGGCGTGCAT CGGATCGAGA CGCCGGTGGG CGACGTCGAG
GCGACGCTGC ACGACGATCT GTCCGTGAGC GTGCGCAACG TGCTCGCGTA CCGGCACGCG
AAGGACGTCG TCGTCGACGT GCCGGGGCAC GGCGCGGTGA CGGGCGACGT CGCGTGGGGC
GGCAACTGGT TCTTCCTCGT GAGCGATCAC GGCCAGCGCG TCGCGGGCGA GAACGTCGCG
GCGCTCGCCG CGTACGCGTC GGCGGTGCGC GCGGCGCTCG AGCGCGCGGG CGTGACGGGC
CGCGACGGCG CGCCGATCGA TCACATCGAG CTGTTCGCCG ACGATCCCGA GTACGACAGC
CGCAGCTTCG TGCTCTGCCC GGGCCACGCG TACGACCGCT CGCCGTGCGG CACCGGCACG
AGCGCGAAGC TCGCGTGCCT CGCCGCCGAC GGCAAGCTCG CGGCGGGCGT GACGTGGCGG
CAGGCGAGCG TGATCGGCAG CGTGTTCTCG GCGAGCTACG CGGCGGCCGA AGGCGGCGTC
GTGCCGACGA TCCGCGGCAG CGCGCACCTG AGCGCGGAGG CGACGCTCGT GATCGAGGAC
GACGATCCGT TCGGCTGGGG CATCGCATCG TGA
|
|---|
| Protein sequence | MKHIHIIDSH TGGEPTRVVV SGFPALGGGT MAERLAVLAR EHDRYRAACI LEPRGSDVLV
GALLCEPVSA GAAAGVIFFN NAGYLGMCGH GTIGLVRTLH HMGRIGPGVH RIETPVGDVE
ATLHDDLSVS VRNVLAYRHA KDVVVDVPGH GAVTGDVAWG GNWFFLVSDH GQRVAGENVA
ALAAYASAVR AALERAGVTG RDGAPIDHIE LFADDPEYDS RSFVLCPGHA YDRSPCGTGT
SAKLACLAAD GKLAAGVTWR QASVIGSVFS ASYAAAEGGV VPTIRGSAHL SAEATLVIED
DDPFGWGIAS
|
|---|
| |