Gene BURPS1106A_A0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0465 
Symbol 
ID4903412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp454481 
End bp456016 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content73% 
IMG OID640143572 
Productmajor facilitator superfamily permease 
Protein accessionYP_001074508 
Protein GI126455502 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.883476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGC ACCTTCCCCA CCCCGCCCTT TCCCGCGCCG CGCTCGTGCG GATCGTGTCG 
ACCGTCAGCG CGGGCTTCGT GATCACGCAG CTCGACGTGA CGATCGTCAA CGTCGCGCTC
GCGCGCATCG GCATCGATCT GCATACGAGC GTCGCGGGCC TGCAATGGAT CGTCGACGCC
TACACGCTCG CGCTCGCGGG CCTGATGCTG TCGGCCGGCG CGCTCGGCGA CCGGTTCGGC
GCGCGCCGGC TGTTCGCCGC CGGGCTCGCG CTCTTCGCCG TCGCATCGTT CGTCTGCGGC
ATCGCCGCGA ACGCGGCGAC GCTCATCGCC GCGCGCGCGC TGCAAGGGCT CGCGGCGGCC
GCGATGCTCC CGAACTCGCT CGCGCTGCTC AACCATGCGT GCGCGCACGA TCCACGGCTG
CGGGCGCGCG CGGTCGGCTG GTGGACCGCG TCGGGCGCGA TCTCGATCGC GGCGGGCCCG
GTGATCGGCG GCGTGCTGAT CGCGCAGTTC GGCTGGCGCA GCATCTTCTT CGTCAATCTG
CCGCTGTGCG CGGCGGGCCT CGCCGCGACG CGCCTGTGGA TCGACAGCGA CGACACGCGC
GCGGCGGCCG CTTCGTCGGC CTCGTCCGCC TCGTCCGCTT CATCCGCCGC CGACGGCGCG
CACCATTCGC ACCCGGCGGC GGACCGGCGC GCATCCGGCC CGAATGCCTG CGCCCCCGCG
CCCAAGCGCG CCGCCGGCGC CGGAACACGC GGCCTCGACC TGCCCGGCCA GTGCCTCGCC
GTCGTCGCGC TCACGCTCTT CACCGGCGCG GTGATCGACT GGCATCCGGC GCTCGTCGCG
ATCGCGCTCG CGGCGGGCGC CGCGTTCGTG TTCGTCGAAT CGCGCAGCGC GCACCCGATG
ATGCCGCTCG CGCTGTTCAG GCGGCGCACG TTCAGCGTCG CCGTGCTGTT CGGTGTCTGC
ATGAATCTGT CGTACTACGG GATCATCTTC GTGCTGAGCC TGTATTTGCA GCGCGTGCGC
CACAACACGC CGCTCGAGGC AGGGCTCGCG TTCCTGCCGC TCACGGGGGG CTTCCTGCTG
TCGAACGTCG CGAGCGGCTG GGCGACCGCG CACTACGGCC CGCGCCGGCC GATGATCGCC
GGCGCGCTGA TCGGCGCGAC CGGTTTCGCG CTGCTGAGCG CGGTGCGTGC CGATACGCCG
ATCGCGATGC TCGTCGTGCC GTTCCTGCTG ATTCCGGGCG GCATGGGGCT CGCGGTGCCC
GCGATGACGA CGACGGTGCT CGCCTCGGTC GAACGCGCGC GCGCCGCGAC CGCGTCGGCC
GTGCTCAATA CCGCGCGGCA GGCGGGCGGC GCGATCGGCG TCGCCGCGTT CGGCGCGCTC
GCGAGCGGCG CGCGGCCGCC GGACATCGTG TCGGGATTGC ACGCGTCGGC GTACGTATCG
GCCGCGCTCT TCATGTTCGC CTCGGCGATG GCGGCCTTCG TGCACGGCGC GCCGCAGCCG
GCGGTGGGCA AGCCGGCGAA CGCGAACGCA CGCTGA
 
Protein sequence
MDTHLPHPAL SRAALVRIVS TVSAGFVITQ LDVTIVNVAL ARIGIDLHTS VAGLQWIVDA 
YTLALAGLML SAGALGDRFG ARRLFAAGLA LFAVASFVCG IAANAATLIA ARALQGLAAA
AMLPNSLALL NHACAHDPRL RARAVGWWTA SGAISIAAGP VIGGVLIAQF GWRSIFFVNL
PLCAAGLAAT RLWIDSDDTR AAAASSASSA SSASSAADGA HHSHPAADRR ASGPNACAPA
PKRAAGAGTR GLDLPGQCLA VVALTLFTGA VIDWHPALVA IALAAGAAFV FVESRSAHPM
MPLALFRRRT FSVAVLFGVC MNLSYYGIIF VLSLYLQRVR HNTPLEAGLA FLPLTGGFLL
SNVASGWATA HYGPRRPMIA GALIGATGFA LLSAVRADTP IAMLVVPFLL IPGGMGLAVP
AMTTTVLASV ERARAATASA VLNTARQAGG AIGVAAFGAL ASGARPPDIV SGLHASAYVS
AALFMFASAM AAFVHGAPQP AVGKPANANA R