Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0416 |
Symbol | bpeE |
ID | 4903857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 390916 |
End bp | 392136 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640143523 |
Product | multidrug efflux pump BpeE |
Protein accession | YP_001074459 |
Protein GI | 126458008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTACTT CCCGTTCGCG GATCGCGGCC GCGGCGTTCG CGGTCGTCTT CATCGCGGGC CTCGGCACGT TCGGCGCGAT CCGCGTGAAT GCGGGCGCGC CGGAGAAATC GGCGGCGCCG CTGCCGGAGG TCGACGTCGC GACCGTGCTG TCGAAGACGA TCACCGATTG GCAGTCCTAC TCGGGCCGCC TCGAGGCGGT CGAGAAGGTC GACGTGCGCC CGCTCGTGTC CGGCACGATC GTGTCGGTGA ATTTCAAGGA CGGCGCGCTC GTGAAGAAGG GCGACGTGCT GTTCGTGATC GATCCGCGCC CGTATCAGGC CGAGGTCGAT CGCGCGGCCG CGCAGCTCGC CGGCGCGCAG GCCCGCAATG GCTACGCACA GAGCGACTGG CAGCGCGCGC AGCGGCTGAT CGGCGACAAC GCGATCGCCA AGCGCGATTA CGACGAGAAG CAGAACGCCG CGCGCGAGGC CTCGGCGAAC CTGAAGGCGG CCGAGGCCGC GCTCGAGACG GCGCGCATCA ACCTCGGCTA CACGCGGATC ACCGCGCCCG TGTCGGGCCG CGTGTCGCGC GCGGAGATCA CGCTCGGCAA CGTCGTGTCG GCGGGCGCGT CGGCCGCACC GCTCACGACG CTCGTGTCGG TGTCGCCGAT CTACGCGTCG TTCGACGCGG ACGAGCAGAC TTACCTGCAA TACATCGGCG GCGCGAAGGA CGGCCGCAAG GTGCCCGTCG AGCTCGGCCT CGCGAACGAG AGCGGCTACT CGCGGCAGGG CGTGATCGAT TCGGTCGACA ACCGGCTCGA TACGTCGTCG GGCACGATCC GCGTGCGTGC GCGCTTCGAC AACGCGGACG GCGCGCTCGT GCCCGGCCTC TACGCGCGCG TGAAGGTGGG CGGCAGCGCG CCGCATCCGG CGCTGCTCAT CGACGACGCG GCGATCAACA CCGATCAGGA CAAGAAGTTC GTGTTCGTCG TCGATCAGCA GGGCCGCGTG TCGTATCGCG AGGTGCAGCT CGGCGCGCAG CACGGCAACC AGCGCGTGAT CGTGGGCGGC CTGGCGGCGA GCGAGCGCAT CGTCGTGAAC GGCACGCAGC GCGTGCGGCC GGGCGAGCAG GTGAAGCCGC ATCTCGTGCC GATGACGGGC GGCGACGACG CTGCCGCCGC GACGCCCGTC GCGGGCGGCG TGCAGCGTCC GCGGGCCGCG CAGGGCAACG CGCGCGCGTG A
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Protein sequence | MRTSRSRIAA AAFAVVFIAG LGTFGAIRVN AGAPEKSAAP LPEVDVATVL SKTITDWQSY SGRLEAVEKV DVRPLVSGTI VSVNFKDGAL VKKGDVLFVI DPRPYQAEVD RAAAQLAGAQ ARNGYAQSDW QRAQRLIGDN AIAKRDYDEK QNAAREASAN LKAAEAALET ARINLGYTRI TAPVSGRVSR AEITLGNVVS AGASAAPLTT LVSVSPIYAS FDADEQTYLQ YIGGAKDGRK VPVELGLANE SGYSRQGVID SVDNRLDTSS GTIRVRARFD NADGALVPGL YARVKVGGSA PHPALLIDDA AINTDQDKKF VFVVDQQGRV SYREVQLGAQ HGNQRVIVGG LAASERIVVN GTQRVRPGEQ VKPHLVPMTG GDDAAAATPV AGGVQRPRAA QGNARA
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