| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0382 |
|---|
| Symbol | |
|---|
| ID | 4903632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 364247 |
|---|
| End bp | 365032 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640143489 |
|---|
| Product | beta-ketoadipate pathway transcription regulator |
|---|
| Protein accession | YP_001074425 |
|---|
| Protein GI | 126458347 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG AATTTCAGGC CAAACCCGGC GACTCCTATG TCCAGTCGTT CGCGCGCGGA
CTCGCGGTGA TTCGCGCGTT CGACGCGGAG CACCCCGAGC AGACGCTCAC CGAGGTCGCC
TCCGCGACCG GCCTGACCCG CGCGGGCGCG CGGCGCATCC TGCTGACGCT GCAGACGCTC
GGCTACGTCG AGGCCGACGG CCGCCTGTTC CGGCTCACGC CGAAGATCCT CGATCTCGGC
TTCGCGTATC TGACATCGAT GCCGTTCTGG AACCTCGCCG AGCCGGTGAT GGAGCAATTG
TCCGCGCGCA TCCACGAAAG CTGCTCGGCG GCCGTGCTCG ATCGCACCGA AATCGTGTAC
GTGCTGCGCG TGCCGACGCA CAAGATCATG ACGATCAATC TGTCGATCGG CAGCCGGCTG
CCCGCGTACT GCACGTCGAT GGGCCGCGTG CTGCTGTCGT CGCTCGACGC CGCCGCGCTC
GACGACACGC TCGCGCAAAG CACGCTGCGC GCGTACACGC CGCGCACGCT CACCGATCCC
GCCGCGCTGA AGGACGAGAT CGCGACCGTG CGCAGCCAGG GCTGGGCGAT CGTCGATCAG
GAACTGGAAG CCGGATTGAT TTCATTGTCG GCGCCGATCC GCAACCGGCG CGGGCAGGTG
ATCGCCGCGA TGAACATCAG CGGCAACGCG CAGCGGCACA CCGCGAAGCA AATGGTGAAG
GCATTCCTCG ATCCGCTGCT GGAAGCGTCG CAGACCGTGT CGCAGCTCGT CGCGCGGCGC
GGCTGA
|
|---|
| Protein sequence | MSTEFQAKPG DSYVQSFARG LAVIRAFDAE HPEQTLTEVA SATGLTRAGA RRILLTLQTL
GYVEADGRLF RLTPKILDLG FAYLTSMPFW NLAEPVMEQL SARIHESCSA AVLDRTEIVY
VLRVPTHKIM TINLSIGSRL PAYCTSMGRV LLSSLDAAAL DDTLAQSTLR AYTPRTLTDP
AALKDEIATV RSQGWAIVDQ ELEAGLISLS APIRNRRGQV IAAMNISGNA QRHTAKQMVK
AFLDPLLEAS QTVSQLVARR G
|
|---|
| |